Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  115 bits (287), Expect = 2e-30
 Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 20/304 (6%)

Query: 8   TLISAALLSTSVSFVAQ---AQDT---VAIVLSTLNNPFFVTM-KDGAEAKAKELGYNLI 60
           T ++A L +T+    A    AQD    +    +T   P+     KD     AK     LI
Sbjct: 10  TAVAAVLAATTALMPADDALAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKHPDVELI 69

Query: 61  VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120
           + D ++   K++++VE+L  + V A+L++P +S  ++  ++ A  +KIPV  LDR     
Sbjct: 70  ITDGEDRTEKQVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETD 129

Query: 121 EVVSHIASDNVVGGEMAGHFIEAKIGSDAK----VIQLEGIAGTSAARERGEG---FMNA 173
           +    +  DN + G  AG +    +G   K    ++++ G  GT  A +R +G   F + 
Sbjct: 130 QYTQFVGGDNKLIGRAAGEYAVELLGGKGKAEGNIVEIWGGMGTQPAHDRHDGFHEFTDK 189

Query: 174 VKGSKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASG--K 231
             G K  LL  Q  D+ + +  N+M   L  N  +  V+  ND MA GA  A + +G  K
Sbjct: 190 EPGIK-NLLDQQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLAAKDAGREK 248

Query: 232 SVMIVGFDG-TDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALK 290
            +  +G D   ++G+  V  G+L AT        GA G+  A K LKGEKVE  + +   
Sbjct: 249 EMKFIGIDALPNEGVTWVNNGELTATFLYATP--GAEGLRQAVKFLKGEKVEKTVTLDTM 306

Query: 291 VIAK 294
            + K
Sbjct: 307 KVTK 310