Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., putative ABC transport system nucleotide binding/ATPase component from Klebsiella michiganensis M5al

 Score =  127 bits (318), Expect = 4e-34
 Identities = 80/300 (26%), Positives = 150/300 (50%), Gaps = 11/300 (3%)

Query: 5   KLTTLISAALLSTSVSFVAQA---QDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIV 61
           KL  L  A  +  S+SF++ A     T A+V       FF  M  GA+  AK  G +L++
Sbjct: 8   KLRLLAVATTMLASMSFISTAGAAAPTYALVQINQQALFFNLMNKGAQDAAKASGKDLVI 67

Query: 62  LDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGE 121
            +S ++P  +   +E+   +GVK IL+   D + +  A++ A  + IPV+ +D     G 
Sbjct: 68  FNSNDNPVAQNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAIDAVLPAGP 127

Query: 122 VVSHIASDNVVGGEMAGH----FIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGS 177
             + +  DN+ GG + G     +++ ++G  A+ + + G   ++   +R +GF   +K +
Sbjct: 128 QAAQVGVDNIEGGRIIGQYFVDYVQKEMGGQAR-LGIVGALNSAIQNQRQKGFEETLKSN 186

Query: 178 -KMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASG--KSVM 234
            K+ +         + K +   ENL+  NPD+ A++A  +   LGA+ A++  G  K + 
Sbjct: 187 PKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAVENQGRQKDIK 246

Query: 235 IVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIAK 294
           + G+D T   I+ ++ G + A + Q P+ +GA  ++  + +  G+ V   I V   V+ K
Sbjct: 247 VFGWDLTAKAISGIDGGYVTAVLQQDPEKMGAEALKALNSITSGKTVPKTILVPATVVTK 306