Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  132 bits (332), Expect = 1e-35
 Identities = 96/285 (33%), Positives = 155/285 (54%), Gaps = 9/285 (3%)

Query: 3   MKKLTTLISAALLSTSVSFVAQAQD--TVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLI 60
           MK   TL++AA L T+ SF AQA +  T+ I++++L+NP++ +   GA  KAKELGY   
Sbjct: 1   MKLRLTLLTAATL-TAFSFAAQAAEKGTIMIMVNSLDNPYYASEAKGASEKAKELGYQTT 59

Query: 61  VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120
           +L    D  K+   ++    + V+ I+++  DS A   AI  A ++ IPV+ ++R     
Sbjct: 60  ILSHGEDVKKQNELIDTAIGKKVQGIILDNADSTASVAAIEKAKKAGIPVVLINREIPVD 119

Query: 121 EV-VSHIASDNV-VGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAV-KGS 177
           ++ +  I  +N   G E+A  F+E K+    K  +L      +    R + F   + +  
Sbjct: 120 DIALEQITHNNFQAGSEVANVFVE-KMAEKGKYAELTCNLADNNCVTRSKSFHQVIDQYP 178

Query: 178 KMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKS-VMIV 236
            M  +A Q A      G  +M+++L A+PDV+ V   N  +ALGA+ A++A+ ++ V++V
Sbjct: 179 DMVSVAKQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAANRNDVVVV 238

Query: 237 GFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKML-KGEK 280
           G DG++D   AV+ G L ATV  Q   I A G+   D  L KGEK
Sbjct: 239 GIDGSNDERDAVKAGTLQATVMLQAQAIAAQGVTDLDNYLQKGEK 283