Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., hypothetical protein from Klebsiella michiganensis M5al

 Score =  137 bits (345), Expect = 3e-37
 Identities = 83/298 (27%), Positives = 162/298 (54%), Gaps = 7/298 (2%)

Query: 1   MRMKKLTTLISAALLSTSVSFVAQAQD-TVAIVLSTLNNPFFVTMKDGAEAKAKELGYNL 59
           M +KK    + A+L++  +  V  A+D +V + ++  ++ F   ++   + + ++ G   
Sbjct: 1   MNIKKT---VVASLIACMLPAVVMAKDISVGVSMALFDDNFLTILRTAMQKEMQKDGVKA 57

Query: 60  IVLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRG--A 117
            V D++ D S++L  V++   +GV AI++NP D++AV   +  A ++ IP++ ++R   A
Sbjct: 58  QVEDAKGDVSQQLQQVQNFIGQGVDAIIVNPVDTNAVKPIMDQATKAGIPLIFVNRRPQA 117

Query: 118 SRGEVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAV-KG 176
              + ++++ SD+V+ G +    +   +     V  L G     + R+R +G    V K 
Sbjct: 118 QLTDKMAYVGSDSVLAGRLQMEALAKAMNGKGNVAILLGDLANESTRDRTKGVEEVVAKY 177

Query: 177 SKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKSVMIV 236
             ++++  Q A F R   ++V+ N + +  D+QA+ + NDEMA+GAL+A+  +   ++I 
Sbjct: 178 PDIKIVQKQTAKFTRNDAVDVVSNWMTSGEDIQAIASNNDEMAIGALQALGKNPNHILIA 237

Query: 237 GFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIAK 294
           G DGT D +  ++ G++ AT+ Q     G   ++ A K+  GEKVE  I V  ++I K
Sbjct: 238 GVDGTPDALQMLKNGKMIATIFQDAKGQGEGAVDAAIKLANGEKVEKVIDVPYQLITK 295