Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., D-ribose ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  410 bits (1054), Expect = e-119
 Identities = 205/295 (69%), Positives = 253/295 (85%), Gaps = 1/295 (0%)

Query: 1   MRMKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLI 60
           M MKKL TL+SA  LS +VS  A A+DT+A+V+STLNNPFFV++K+GA+ +A +LGYNL+
Sbjct: 1   MNMKKLATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSLKEGAQKEADKLGYNLV 60

Query: 61  VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120
           VLDSQN+P+KEL+NV+DLTVRG K +LINPTDSDAV NA+++AN++KIPV+TLDR AS+G
Sbjct: 61  VLDSQNNPAKELANVQDLTVRGTKLLLINPTDSDAVGNAVKLANQAKIPVITLDRQASKG 120

Query: 121 EVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGSKMQ 180
           +VVSHIASDNV+GG+MAG +I  K+G +AK+I+L+GIAGTSAARERGEGF  AV   K  
Sbjct: 121 DVVSHIASDNVLGGKMAGDYIAKKVGENAKIIELQGIAGTSAARERGEGFQQAVAAHKFN 180

Query: 181 LLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKS-VMIVGFD 239
           +LASQPADFDRTKGLNVM+NLL A+PDVQAVFAQNDEMALGALRA+Q +GKS VM+VGFD
Sbjct: 181 VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD 240

Query: 240 GTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIAK 294
           GT DG  AV  G+LAAT+AQ P+ IG  G+ETADK+LKGEKVE   P+ LK++ K
Sbjct: 241 GTPDGEKAVNSGKLAATIAQLPEQIGVKGVETADKVLKGEKVETSYPLELKLVIK 295