Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Ribose import binding protein RbsB from Enterobacter sp. TBS_079

 Score =  152 bits (384), Expect = 9e-42
 Identities = 88/265 (33%), Positives = 150/265 (56%), Gaps = 9/265 (3%)

Query: 3   MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVL 62
           MKKL   I AAL++ +        + +      L  PF V M+  A   AKE+G  L VL
Sbjct: 1   MKKL---ILAALITMTAGAAMAENEQIVFSTPNLAMPFEVHMQRTAVKAAKEMGVKLQVL 57

Query: 63  DSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEV 122
           D Q    K+++++E+   RG +  +++P D +AVS+A+     + +PV+TLDR     + 
Sbjct: 58  DGQGSSPKQVADLENAITRGAQGFIVSPNDVNAVSSAVDEIQDANLPVVTLDRSVDSQKK 117

Query: 123 VSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVK--GSKMQ 180
           V H  ++N  GG+  G F+++K  + A +I L G  G+S+  ER +G  +++K  G K +
Sbjct: 118 VPHFGANNYKGGQAIGDFVKSKFPNGADIILLTGQPGSSSNIERTKGIRDSLKAGGDKYK 177

Query: 181 LLASQPADFDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASG---KSVMIV 236
           ++A Q  ++ R++G+ ++E++L + P   Q + + ND+MALGA+ A+Q  G     +++ 
Sbjct: 178 IVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQGQGVKPGEILVT 237

Query: 237 GFDGTDDGIAAVERGQLAATVAQQP 261
           GFD   + +A V  G LA T  Q+P
Sbjct: 238 GFDAVPEALARVRDGWLAVTADQRP 262