Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., monosaccharide ABC transporter membrane protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (582), Expect = 1e-64
 Identities = 131/299 (43%), Positives = 182/299 (60%), Gaps = 5/299 (1%)

Query: 36  IALLFLVVVVSF--LNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLA 93
           I L F +  V F  +  NF +  NLLN++RQ +   I+AV MTLV+ T GIDLSVGS LA
Sbjct: 30  IGLFFALCFVLFALVTDNFLSGANLLNVIRQNAPLLIVAVAMTLVVTTGGIDLSVGSTLA 89

Query: 94  LCGAFAA-TLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGV 152
           L GA AA  L A  +P  + +   L  GA +GA++G  IA   + AFI TL T+T++RG+
Sbjct: 90  LVGALAAMALNAWHLPWPLVLLGGLAVGAMIGALNGYFIAYAGIPAFIVTLATLTIIRGL 149

Query: 153 TMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVY 212
            M+ T G  I     + A  F   G G+ LG+P+  WL ++V  G   +L   RFGRY+ 
Sbjct: 150 AMLLTQGYSIPVPREEAA--FLALGRGWFLGVPLTAWLALLVTLGGVLVLGKMRFGRYLT 207

Query: 213 AVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAA 272
            +G N  + R +G+N   V + VY + G+ AALAG+IVT+RL S     G G+EL+ IAA
Sbjct: 208 GIGANAESVRRAGVNHRGVLLRVYMLSGMAAALAGMIVTARLGSGSSNQGEGFELEVIAA 267

Query: 273 VVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDNK 331
           VVLG TSL GG G I+GTL+G L +  + N L L  VS +Y  IA  +++LLA+ ++ +
Sbjct: 268 VVLGSTSLFGGFGTIVGTLLGVLTMAAIKNGLILAHVSPFYTQIATGLIVLLAIWLNTR 326