Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  217 bits (552), Expect = 4e-61
 Identities = 122/297 (41%), Positives = 180/297 (60%), Gaps = 5/297 (1%)

Query: 34  SLIALLFLVVVVSFLNPN-FFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVL 92
           +L+ LL ++ ++  L  N F+T +N+ N+LRQ ++ AI+AVG T VI+TAGIDLSVG+V+
Sbjct: 24  TLVGLLVVLWLLLGLATNAFWTPNNISNLLRQGAMTAILAVGQTFVIITAGIDLSVGAVV 83

Query: 93  ALCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGV 152
                  A L+A  VP+ +A+   L  G  +GA     I +  +  FI TL T+T LRG+
Sbjct: 84  GFTSVIVAWLLAAGVPLWLAIIATLAIGVLIGAFHAFGIVRMGLPPFIITLATLTSLRGI 143

Query: 153 TMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVY 212
            ++ T+G  IS     T D F  F     LGIP   W+++VV   A+  L+ +RFGRY++
Sbjct: 144 GLLITNGSTISI----TNDAFTTFSRADFLGIPSLFWMVIVVAIPAYVFLHLSRFGRYLF 199

Query: 213 AVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAA 272
           AVG N  A RLSG+NV+R     Y +    AA  G+++ SR+     T   G+EL AIA+
Sbjct: 200 AVGSNSEAARLSGVNVNRTIYLAYILSSTCAAFVGLLLASRIGIGNATQAEGWELQAIAS 259

Query: 273 VVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVD 329
            V+GGTSL G  G + G L+GA I+  +NN  NLL+V+S++Q I   ++I++ V  D
Sbjct: 260 SVIGGTSLFGAVGSVHGPLLGAFILATINNGANLLNVNSFWQRIITGLLIIVIVYFD 316