Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  231 bits (588), Expect = 2e-65
 Identities = 129/292 (44%), Positives = 184/292 (63%), Gaps = 9/292 (3%)

Query: 39  LFLVVVVSFLNPNFFTVDNLLNILRQTSVNA-IIAVGMTLVILTAGIDLSVGSVLALCGA 97
           L LV+V SF +  F T  NL+N++RQ +  A I+A+GM  V+LT GIDLSVGS+ A+   
Sbjct: 32  LVLVIVASFWSDAFLTERNLMNVVRQVASGAGIMAIGMLFVVLTRGIDLSVGSIAAVGSV 91

Query: 98  FAATLVAME-VPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVY 156
             A LVA +   V +A+   +L GAA G ++G  +A  ++ +F+ +L  M + RG++++ 
Sbjct: 92  LCAHLVAAQGYGVPMAILLVILTGAACGVVTGFFVAYMRLPSFVISLAMMAIARGISLII 151

Query: 157 TDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVGG 216
           + GRPI+ G      +   FG+G+  GIP P  LM+V++A    +L +T FGR V A+G 
Sbjct: 152 SAGRPITMG--SPGASLVDFGSGFLFGIPQPAILMLVIYAIGGVVLLYTSFGRIVTAIGS 209

Query: 217 NESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVLG 276
           NE A RLSG+ V+R  + VY I G LAA+AGI+   R     P  G+G ELD IAAVV+G
Sbjct: 210 NEEAVRLSGVPVERYVLSVYVISGALAAVAGIVAAGRTGIGTPQVGVGAELDVIAAVVIG 269

Query: 277 GTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLV 328
           G SLMGG+G +  TL+GALI+G + N +NL  V  Y+Q      V LLA+L+
Sbjct: 270 GASLMGGRGGMFNTLLGALILGIITNIMNLAGVPGYHQN-----VYLLAMLI 316