Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  255 bits (651), Expect = 1e-72
 Identities = 140/342 (40%), Positives = 215/342 (62%), Gaps = 18/342 (5%)

Query: 7   MSTRTMTNTTSD--NRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQ 64
           M+T T T   +D  +   LL+   L++ ++ IAL  +V   S   PNF +  NL+ + + 
Sbjct: 1   MTTATTTTNATDATSGSVLLT---LMKLRTFIALFAVVAFFSIFAPNFLSTANLILMSKH 57

Query: 65  TSVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEVP----------VLVAVP 114
            ++NA +A+GMT VI+T GIDLSVGS++ LCG  A  L+   +           V+    
Sbjct: 58  VALNAFLAMGMTFVIITGGIDLSVGSIVGLCGMVAGGLILNGIDLQFGYTVYFNVVEVCL 117

Query: 115 TALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTDGR--PISTGFTDTADT 172
             L  G  +GA++G++I K  V  FIATL T+ + RG  ++ + G+  P   G  + A T
Sbjct: 118 ITLAVGIVIGAVNGLLITKLNVAPFIATLGTLYVARGFALLSSGGQTFPNLVGKPELATT 177

Query: 173 -FAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRV 231
            FA+ G+G  LG+PV +W+++VV   A Y+  +T  GR+++AVGGNE A R+SGI VDRV
Sbjct: 178 GFAFLGSGRLLGLPVSIWVLIVVALAAAYVARYTPIGRHIFAVGGNERAARMSGIRVDRV 237

Query: 232 KIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTL 291
           K+ VY   G  AA+ G++++S L ++ P  G  +EL+AIAA VLGGTS+ GG+G I GT+
Sbjct: 238 KMFVYMFSGFCAAIVGLVISSELMASHPATGNSFELNAIAAAVLGGTSMSGGRGTIGGTI 297

Query: 292 IGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDNKNK 333
           IGA +IG L++ L ++ +SS++QM+ K +VI++AV+VD   +
Sbjct: 298 IGAFVIGILSDGLVMMGISSFWQMVIKGIVIIVAVVVDQAQR 339