Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  243 bits (621), Expect = 4e-69
 Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 13/322 (4%)

Query: 21  KKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVIL 80
           +K +   +L++ ++ IALL ++   S + PNF T  NLL + +  ++  ++A+GMTLVIL
Sbjct: 3   QKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVIL 62

Query: 81  TAGIDLSVGSVLALCGAFAATLVAMEVP------VLVAVPTALLA----GAALGAISGII 130
           T GIDLSVG+V  +CG  A  L+   +P      +   VP  +L     G  +G ++G +
Sbjct: 63  TGGIDLSVGAVAGICGMVAGALLTNGLPLWNGSVIFFNVPEVILCVALFGVLVGFVNGAV 122

Query: 131 IAKGKVQAFIATLVTMTLLRGVTMVYTDGR--PISTGFTDTADT-FAWFGTGYTLGIPVP 187
           I +  V  FI TL  M + RG  +++ DG   P   G     +T F+  G+G  +GI +P
Sbjct: 123 ITRFGVAPFICTLGMMYVARGSALLFNDGSTYPNLNGMEALGNTGFSTLGSGTLMGIYLP 182

Query: 188 VWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAG 247
           +WLM+      ++L   T  GRY+YA+GGNESA RL+G+ + + KI VYA  GL +A  G
Sbjct: 183 IWLMIGFLLLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCSAFVG 242

Query: 248 IIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLL 307
           +IV S+L +A P  G  +E+DAI A VLGGT+L GG+GR+ G++IGA +I FL + + ++
Sbjct: 243 LIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMM 302

Query: 308 DVSSYYQMIAKAVVILLAVLVD 329
            VS ++QM+ K VVI+ AV+VD
Sbjct: 303 GVSDFWQMVIKGVVIVTAVVVD 324