Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., D-allose transporter subunit from Klebsiella michiganensis M5al

 Score =  218 bits (556), Expect = 1e-61
 Identities = 124/294 (42%), Positives = 178/294 (60%), Gaps = 6/294 (2%)

Query: 38  LLFLVVVVSFLNPNFF-TVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCG 96
           L  +V +   L+  +F T +N+  I  Q+SV  +I +G    IL AGIDLSVG++LAL G
Sbjct: 32  LAIIVAIFGTLSSEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSG 91

Query: 97  AFAATLVAMEV-PVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMV 155
              A L+   V P L A+   +L G ALGAI+G ++    +  FI TL T  + RG+T+V
Sbjct: 92  MVTAKLMLAGVDPFLAALIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLV 151

Query: 156 YTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVG 215
            +D   +     D  + FA       LGIPVPV   ++V    W+L    R GR +YA+G
Sbjct: 152 ISDANSVYGFSFDFVNFFA----ATPLGIPVPVIFSLIVAVILWFLTTRMRVGRNIYALG 207

Query: 216 GNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVL 275
           GN+++   SGI+V    + V+ I G+ A LAG++ T+RL +A+P AGMG+E  AIA+ ++
Sbjct: 208 GNKNSAFYSGIDVKFHMLLVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAII 267

Query: 276 GGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVD 329
           GGTS  GGKGRI   +IG LIIG +NN LN+L V +YYQ++    +I+ AV +D
Sbjct: 268 GGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALD 321