Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Ribose import permease protein RbsC from Enterobacter sp. TBS_079

 Score =  262 bits (670), Expect = 8e-75
 Identities = 141/311 (45%), Positives = 202/311 (64%), Gaps = 16/311 (5%)

Query: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94
           LI ++ L++     N NFF+  N+ NIL + S+  I+AVGMT VILTAGIDLSVGS+LA+
Sbjct: 30  LIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAV 89

Query: 95  CGAFAATLVAME------------VPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIAT 142
           C   AA ++  +            +  L+ +   L  G A+G + G+ + + ++  FI T
Sbjct: 90  CAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICLAMGTAIGFLHGLGVTRLRLPPFIVT 149

Query: 143 LVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLL 202
           L  MT+ RG+T+V  DG PI+ GF      + W+G G  LGI +P+W+  +V  G +  L
Sbjct: 150 LGGMTIWRGLTLVINDGAPIA-GFDPG---YRWWGRGELLGISIPIWIFAIVALGGYLAL 205

Query: 203 NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAG 262
           + TR+GR+VYA+GGN  A RL+G+NV RV + VY + G LA LAG I+++RL SA+  AG
Sbjct: 206 HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLGSAEAVAG 265

Query: 263 MGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVI 322
           + +EL  IA+VV+GGTSLMGG GRI GT+IG++I+G L N L L++VS+YYQ I   ++I
Sbjct: 266 ISFELRVIASVVIGGTSLMGGYGRIGGTIIGSIIMGILINGLVLMNVSAYYQQIITGLII 325

Query: 323 LLAVLVDNKNK 333
           +LAV  D   K
Sbjct: 326 VLAVAFDTYAK 336