Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., D-allose transport system permease protein AlsC from Enterobacter sp. TBS_079

 Score =  219 bits (557), Expect = 1e-61
 Identities = 128/325 (39%), Positives = 186/325 (57%), Gaps = 6/325 (1%)

Query: 7   MSTRTMTNTTSDNRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFF-TVDNLLNILRQT 65
           M   T      D +K      +  +  +   L  +V +   L+  +F T +N+  I  Q+
Sbjct: 1   MGITTRVKRDMDEKKPFNFALFWDKYGTFFILAIIVAIFGTLSSEYFLTTNNITQIFVQS 60

Query: 66  SVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEV-PVLVAVPTALLAGAALG 124
           SV  +I +G    IL AGIDLSVG++LAL G   A L+   V P L A+   +L G ALG
Sbjct: 61  SVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVAPFLAALIGGVLVGGALG 120

Query: 125 AISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGI 184
           AI+G ++    +  FI TL T  + RG+T+V +D   +     D  + FA       LG+
Sbjct: 121 AINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFA----ANLLGV 176

Query: 185 PVPVWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAA 244
           PVPV   +VV    W+L    R GR +YA+GGN+++   SGI+V    + V+ I G+ A 
Sbjct: 177 PVPVIFSLVVAVILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAG 236

Query: 245 LAGIIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNAL 304
           LAG++ T+RL +A+P AGMG+E  AIA+ ++GGTS  GGKGRI   +IG LIIG +NN L
Sbjct: 237 LAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGL 296

Query: 305 NLLDVSSYYQMIAKAVVILLAVLVD 329
           N+L V +YYQ++    +I+ AV +D
Sbjct: 297 NILQVQTYYQLVVMGGLIIAAVALD 321