Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., inositol ABC transport system, permease protein IatP from Caulobacter crescentus NA1000

 Score =  246 bits (629), Expect = 4e-70
 Identities = 141/305 (46%), Positives = 192/305 (62%), Gaps = 9/305 (2%)

Query: 31  EQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGS 90
           + ++++ LL LV V    N  F T  N LNIL + S+  IIAVGMT VIL  GID++VGS
Sbjct: 25  KHRTILFLLLLVAVFGAANERFLTARNALNILSEVSIYGIIAVGMTFVILIGGIDVAVGS 84

Query: 91  VLA---LCGAFAATLVAMEVPV--LVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVT 145
           +LA   +  A+  T V  + P   L+A+  + L G A G + G  +    V AFI TL  
Sbjct: 85  LLAFASIAAAYVVTAVVGDGPATWLIALLVSTLIGLAGGYVQGKAVTWLHVPAFIVTLGG 144

Query: 146 MTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHT 205
           MT+ RG T++  DG PIS GF D    + W+G+G  L +PVPV +  +V A     L +T
Sbjct: 145 MTVWRGATLLLNDGGPIS-GFNDA---YRWWGSGEILFLPVPVVIFALVAAAGHVALRYT 200

Query: 206 RFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGY 265
           R+GR VYAVGGN  A RLSG+NVD +   VYAI G LA L+G ++++RL SA+  AG GY
Sbjct: 201 RYGRQVYAVGGNAEAARLSGVNVDFITTSVYAIIGALAGLSGFLLSARLGSAEAVAGTGY 260

Query: 266 ELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLA 325
           EL  IA+VV+GG SL GG G + GT++GAL+IG L+N L +L V+SY Q +   ++I+ A
Sbjct: 261 ELRVIASVVIGGASLTGGSGGVGGTVLGALLIGVLSNGLVMLHVTSYVQQVVIGLIIVAA 320

Query: 326 VLVDN 330
           V  D+
Sbjct: 321 VAFDH 325