Pairwise Alignments

Query, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., ribose ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  239 bits (611), Expect = 6e-68
 Identities = 136/326 (41%), Positives = 202/326 (61%), Gaps = 17/326 (5%)

Query: 15  TTSDNRKKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVG 74
           T S  R ++ +   L +  +  +L+ L+V  SF +P F  +DN+L IL+ T+VN ++A+ 
Sbjct: 15  TFSGLRARVFTPTALQKLLAFGSLILLLVFFSFASPAFMQMDNMLGILQATAVNGVLAIA 74

Query: 75  MTLVILTAGIDLSVGSVLA----LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGII 130
            T VI+T GIDLSVG+++     +CG F   L    +P+   V  A+  GA  G +SG +
Sbjct: 75  CTFVIITGGIDLSVGTLMTFTAVICGVF---LTYWHLPMWTGVLAAIGTGAICGTVSGTL 131

Query: 131 IAKGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLG-----IP 185
            AK K+  FIATL  M LL+G+++V +  +PI   FTDT + F        +G     +P
Sbjct: 132 TAKMKIPPFIATLGMMMLLKGLSLVVSADKPIY--FTDT-ENFYMISQDSLIGDLLPSLP 188

Query: 186 VPVWLMVVVFAG--AWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLA 243
           VP  ++++ F    +   LN T  GRY +A+G NE A RLSG+NVDR KI +Y + G + 
Sbjct: 189 VPNAVLILFFLAVVSSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLSGAIC 248

Query: 244 ALAGIIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNA 303
            +AG+++ SRL+SAQP  G GYEL+AIAAVV+GGTSL GG G I+GT+IGA I+  L N 
Sbjct: 249 GIAGLLIASRLNSAQPALGQGYELEAIAAVVIGGTSLSGGAGTILGTIIGAFIMSVLTNG 308

Query: 304 LNLLDVSSYYQMIAKAVVILLAVLVD 329
           L ++ V+  +Q++   ++I+LAV  D
Sbjct: 309 LRIMSVAQEWQIVVTGLIIILAVYGD 334