Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., Inositol transport system ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  457 bits (1175), Expect = e-133
 Identities = 240/490 (48%), Positives = 326/490 (66%), Gaps = 1/490 (0%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L +  + K FPGV AL    L V PG V+ALMGENGAGKSTLMK++ GIY  DAG +  
Sbjct: 26  LLEVVNVSKGFPGVVALSDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGELRL 85

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
           +G+PV+F  P  +  AGI++IHQELNL+P ++IAENI++GRE  +    +   EMHR   
Sbjct: 86  RGKPVTFDTPLAALQAGIAMIHQELNLMPHMSIAENIWIGREQLNGLHMVDHGEMHRCTA 145

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
           +LL RL +K   +  +G LS+ E+QMVEIAKA+S++S ++IMDEPT A+T+TE   LF++
Sbjct: 146 RLLERLRIKLDPEEQVGNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITETEVAHLFSI 205

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I +L+ QG GI+YI+H++ E+F I D++ V RDG +IG  R    + D LI MMVGR+L 
Sbjct: 206 IADLKSQGKGIIYITHKMNEVFAIADEVAVFRDGAYIGLQRADSMDGDSLISMMVGRELS 265

Query: 245 EQYPRIAAQQGDISLEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMKVIYGAL 303
           + +P      GD+ L V  L+  G+   VSF L  GEILG++GLMG+GRT + + I+G  
Sbjct: 266 QLFPVREQPIGDLVLSVRDLSLDGIFKGVSFDLHAGEILGIAGLMGSGRTNVAEAIFGVT 325

Query: 304 PSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKG 363
           PS  G I L+G+ V    P   +  G A ++EDRK  GL   LSV ENM +  L      
Sbjct: 326 PSTGGEILLDGQPVRISDPHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVLPHYVGN 385

Query: 364 VQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPT 423
             I+        +D  +   +KTPS EQ I  LSGGNQQK  +A+ LMT P++LILDEPT
Sbjct: 386 GFIQQKALRALCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRILILDEPT 445

Query: 424 RGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEAD 483
           RG+DVGAK EIY+LI+   +EGM++I++SSE+PEVLGMSDR++VMHEG + G     EA 
Sbjct: 446 RGIDVGAKAEIYRLISYLASEGMAVIMISSELPEVLGMSDRVMVMHEGDLMGTLNRGEAT 505

Query: 484 QEKLMACAVG 493
           QE++M  A G
Sbjct: 506 QERVMQLASG 515



 Score =  102 bits (253), Expect = 4e-26
 Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 5/224 (2%)

Query: 271 DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGI 330
           DV   ++ G +L + G  GAG++ LMK+I G    + G + L G+ V   +P   L  GI
Sbjct: 44  DVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGELRLRGKPVTFDTPLAALQAGI 103

Query: 331 AYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSRE 390
           A I ++     L+  +S+ EN+ +   +QL+    + H +        +    IK    E
Sbjct: 104 AMIHQELN---LMPHMSIAENIWI-GREQLNGLHMVDHGEMHRCTARLLERLRIKLDPEE 159

Query: 391 QIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIIL 450
           Q+ GNLS   +Q V IAK +     +LI+DEPT  +       ++ +I   K++G  II 
Sbjct: 160 QV-GNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITETEVAHLFSIIADLKSQGKGIIY 218

Query: 451 VSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494
           ++ +M EV  ++D + V  +G   G   A   D + L++  VGR
Sbjct: 219 ITHKMNEVFAIADEVAVFRDGAYIGLQRADSMDGDSLISMMVGR 262