Pairwise Alignments
Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056
Subject, 525 a.a., monosaccharide ABC transporter ATP-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a
Score = 477 bits (1227), Expect = e-139
Identities = 248/490 (50%), Positives = 337/490 (68%), Gaps = 1/490 (0%)
Query: 5 ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
+L +S + K FPGV AL+ L V PG V+ALMGENGAGKSTLMK++ GIY DAG I
Sbjct: 32 LLEISHVSKGFPGVVALNDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGEIRL 91
Query: 65 QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
+G+PVSF P + AGI++IHQELNL+P ++IAENI++GRE + + EMHR
Sbjct: 92 RGKPVSFDTPLSALQAGIAMIHQELNLMPFMSIAENIWIGREQLNGLHMVDHREMHRCTA 151
Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
+LL RL +K + L+G LS+ E+QMVEIAKA+S+ S V+IMDEPT A+T+TE LF++
Sbjct: 152 ELLERLRIKLDPEELVGTLSIAERQMVEIAKAVSYNSDVLIMDEPTSAITETEVAHLFSI 211
Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
I++LR QG GI+YI+H++ E+FEI D++ V RDG +IG R + D LI MMVGR+L
Sbjct: 212 ISDLRAQGKGIIYITHKMNEVFEIADEVAVFRDGAYIGLQRADSMDGDSLITMMVGRELT 271
Query: 245 EQYPRIAAQQGDISLEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMKVIYGAL 303
+ +P GD+ L V L+ +G+ DVSF L+ GE+LG++GLMG+GRT + + ++G
Sbjct: 272 QLFPEREKPAGDVLLSVNRLSLNGIFKDVSFDLRAGEVLGIAGLMGSGRTNVAETLFGIT 331
Query: 304 PSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKG 363
PS+ G + +G+TV+ P + G A ++EDRK GL LSV ENM + L +
Sbjct: 332 PSDSGEVRFDGKTVHIGDPHQAIELGFALLTEDRKLTGLFPCLSVMENMEMAVLANYAGN 391
Query: 364 VQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPT 423
++ +D + +KTPS EQ I LSGGNQQK +A+ LMT PKVLILDEPT
Sbjct: 392 GFVQQKALRSQCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPKVLILDEPT 451
Query: 424 RGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEAD 483
RG+DVGAK EIY+LI+ +EGM++I++SSE+PEVLGMSDR++VMHEG + G SEA
Sbjct: 452 RGIDVGAKVEIYRLISLLASEGMAVIMISSELPEVLGMSDRVMVMHEGEMMGILDRSEAT 511
Query: 484 QEKLMACAVG 493
QEK+M A G
Sbjct: 512 QEKVMHLASG 521
Score = 103 bits (257), Expect = 1e-26
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 269 VHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLAN 328
++DV ++ G +L + G GAG++ LMK+I G + G I L G+ V+ +P L
Sbjct: 48 LNDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGEIRLRGKPVSFDTPLSALQA 107
Query: 329 GIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPS 388
GIA I ++ L+ +S+ EN+ + +QL+ + H + + + IK
Sbjct: 108 GIAMIHQELN---LMPFMSIAENIWI-GREQLNGLHMVDHREMHRCTAELLERLRIKLDP 163
Query: 389 REQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSI 448
E+++G LS +Q V IAK + VLI+DEPT + ++ +I+ +A+G I
Sbjct: 164 -EELVGTLSIAERQMVEIAKAVSYNSDVLIMDEPTSAITETEVAHLFSIISDLRAQGKGI 222
Query: 449 ILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494
I ++ +M EV ++D + V +G G A D + L+ VGR
Sbjct: 223 IYITHKMNEVFEIADEVAVFRDGAYIGLQRADSMDGDSLITMMVGR 268
Score = 82.4 bits (202), Expect = 4e-20
Identities = 52/224 (23%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 25 SLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQGQPVSFKGPRDSQLAGISI 84
S ++ G V+ + G G+G++ + + L GI D+G + + G+ V P + G ++
Sbjct: 301 SFDLRAGEVLGIAGLMGSGRTNVAETLFGITPSDSGEVRFDGKTVHIGDPHQAIELGFAL 360
Query: 85 IHQE---LNLIPQLTIAENIFLGREMT-SPFGRILWDEMHRKADQLLARLNVKH-SAKTL 139
+ ++ L P L++ EN+ + + G + + + + + +L VK S +
Sbjct: 361 LTEDRKLTGLFPCLSVMENMEMAVLANYAGNGFVQQKALRSQCEDMCKKLRVKTPSLEQC 420
Query: 140 LGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNVINELREQGCGIVYIS 199
+ LS G QQ +A+ L KV+I+DEPT + ++ +I+ L +G ++ IS
Sbjct: 421 IDTLSGGNQQKALLARWLMTNPKVLILDEPTRGIDVGAKVEIYRLISLLASEGMAVIMIS 480
Query: 200 HRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKL 243
L E+ + D + V+ +G+ +G + ++ ++ + G K+
Sbjct: 481 SELPEVLGMSDRVMVMHEGEMMGILDRSEATQEKVMHLASGHKV 524