Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  436 bits (1122), Expect = e-127
 Identities = 227/492 (46%), Positives = 327/492 (66%), Gaps = 2/492 (0%)

Query: 2   TQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGS 61
           ++ +L    + K FPGV ALD     +  G V ALMGENGAGKSTLMK+L GIY  D G 
Sbjct: 20  SEYLLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGE 79

Query: 62  IEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHR 121
           ++ +G  +  K P D+   GI++IHQELNL+P +T+AENI++ RE  + FG +   EM R
Sbjct: 80  VKLRGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREPKNRFGFVDHGEMRR 139

Query: 122 KADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESL 181
              +L  RL +    +  +  LS+  +QMVEIAKA+S+ES V+IMDEPT ALT+ E   L
Sbjct: 140 MTAKLFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHL 199

Query: 182 FNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGR 241
           F +I +LR QG GIVYI+H++ E+FEI D+ +V RDGK+IG     +   D +I MMVGR
Sbjct: 200 FEIIRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGR 259

Query: 242 KLEEQYPRIAAQQGDISLEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMKVIY 300
           ++ + +P+     GD+ L V  LT +GV  DVSF ++ GEILGV+GL+G+GR+ + + ++
Sbjct: 260 EITQMFPKEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAETLF 319

Query: 301 GALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCAL-DQ 359
           G  P+  G I ++G+ V   S    + + +A+++EDRK  G +L L + ENM +  L D+
Sbjct: 320 GVTPASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCLLILDILENMQIAVLQDK 379

Query: 360 LSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLIL 419
             K   +   +   A ++  R   +KTP+ ++ + NLSGGNQQKV I + L+T P++LIL
Sbjct: 380 FVKRGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLTNPRILIL 439

Query: 420 DEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMA 479
           DEPTRG+DVGAK EI++L+ +    G+++I++SSEMPEVLGMSDRI+VMHEGR++G    
Sbjct: 440 DEPTRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHEGRVTGILDR 499

Query: 480 SEADQEKLMACA 491
           +EA Q K+M  A
Sbjct: 500 AEATQIKVMELA 511



 Score = 97.8 bits (242), Expect = 8e-25
 Identities = 64/224 (28%), Positives = 115/224 (51%), Gaps = 5/224 (2%)

Query: 271 DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGI 330
           DV F LK+G +  + G  GAG++ LMK++ G    ++G + L G  +   SP D L NGI
Sbjct: 41  DVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGIRLKSPLDALENGI 100

Query: 331 AYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSRE 390
           A I ++     L+  ++V EN+ +    +   G         +    F RL     P  E
Sbjct: 101 AMIHQELN---LMPFMTVAENIWIRREPKNRFGFVDHGEMRRMTAKLFERLKIDLDPEIE 157

Query: 391 QIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIIL 450
             + +LS  N+Q V IAK +  +  VLI+DEPT  +       ++++I   +++G+ I+ 
Sbjct: 158 --VRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEIIRDLRSQGIGIVY 215

Query: 451 VSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494
           ++ +M E+  ++D   V  +G+  G  +++E  ++ ++   VGR
Sbjct: 216 ITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGR 259