Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., L-arabinose transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  384 bits (986), Expect = e-111
 Identities = 210/493 (42%), Positives = 315/493 (63%), Gaps = 4/493 (0%)

Query: 3   QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62
           Q  L    I K +PGV+AL + S +V  G V  LMGENGAGKSTL++VL+G  + D G I
Sbjct: 2   QDFLEFQSISKGYPGVQALSEVSFSVRKGAVHGLMGENGAGKSTLIRVLSGDQAADTGEI 61

Query: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122
              G+P  ++  RD+  AG+ +IHQEL L+P+LT+AEN++LGR      G I   ++ R 
Sbjct: 62  RINGEPQHYRSVRDAFNAGVIVIHQELQLVPELTVAENLWLGR-FPGKAGVIDRRQLIRV 120

Query: 123 ADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLF 182
               LA + +    +  +  LS+GE+QMVEIAKA+  +++VI +DEPT +L+  E+E LF
Sbjct: 121 VSDRLAEIGIDVDPEAKVASLSIGERQMVEIAKAVMTDARVIALDEPTSSLSSRESEILF 180

Query: 183 NVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIG-ECRVCDTNEDGLIEMMVGR 241
            +I+ LR  G  I+Y+SHRL EIF +C+ +TVLRDG+       +     + +I  MVGR
Sbjct: 181 ALIDRLRSNGTVILYVSHRLDEIFRLCNSLTVLRDGRLAAHHPDISKVGREQIIAEMVGR 240

Query: 242 KLEEQYPRIAAQQGDISLEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMKVIY 300
           ++   +   A   G   L V  ++G+ +   +SFT++ GEILG  GL+GAGR+E+ +++Y
Sbjct: 241 EISNIWGWRARTLGAARLTVERVSGANLPQPISFTVRAGEILGFFGLIGAGRSEMARLVY 300

Query: 301 GALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQL 360
           GA    +G + ++G  V   SP+  +  G+    EDRK DG+V G S++ENM++ +    
Sbjct: 301 GADRRRQGKVLVDGLAVPADSPRLSIRAGVVLCPEDRKFDGIVQGRSIEENMAISSRRHF 360

Query: 361 SKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTK-PKVLIL 419
           S    +    E    + FI    ++TPSR Q I NLSGGNQQKV + + L  +  KVL++
Sbjct: 361 SPFGVVDKGKEAELAERFIAKLRVRTPSRHQDIVNLSGGNQQKVILGRWLSEEGVKVLLI 420

Query: 420 DEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMA 479
           DEPTRG+DVGAK EIY+++ +  A+GM+I+++SSE+PEV+G++DRILVM EGRI+ E   
Sbjct: 421 DEPTRGIDVGAKSEIYEILYELAAQGMAIVVISSELPEVMGIADRILVMCEGRIAAEIDR 480

Query: 480 SEADQEKLMACAV 492
           S+ D+ +++A A+
Sbjct: 481 SDFDEHRILAAAL 493