Pairwise Alignments
Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056
Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395
Score = 460 bits (1183), Expect = e-134
Identities = 237/490 (48%), Positives = 331/490 (67%), Gaps = 1/490 (0%)
Query: 5 ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
+L L I K FPGV+ALD SL + PG V ALMGENGAGKSTLMKVL GI+ D G I
Sbjct: 7 VLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIV 66
Query: 65 QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
QPV GP D++ GI IHQEL+L +L++AENI+LG FG + W E+ K +
Sbjct: 67 AEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRFGLVDWAELEAKTN 126
Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
+L +L V +AKT +G+LS+ QQMVEIA+AL+ ++K +I DEPT +LTD E LF V
Sbjct: 127 AILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLFEV 186
Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
I++L+EQG GI YISHR++EIF+I D I+VLRDG++ G +TNE+ + +MM+GRKL+
Sbjct: 187 ISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQMMIGRKLD 246
Query: 245 EQYPRIAAQQGDISLEVIGLT-GSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGAL 303
+ G+++LEV GL+ GS DV+F +++GE++G GL+GAGRTE+ + ++G
Sbjct: 247 LSRNEAHHELGEVALEVRGLSCGSLFEDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLR 306
Query: 304 PSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKG 363
G I L+G V SP D + GI+ + EDRKG GLVLG++ ++NM+L +D L G
Sbjct: 307 NPTSGSIFLDGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAG 366
Query: 364 VQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPT 423
+ E+ D + +I+TP +Q++GNLSGGNQQK+ I K L +P VLI+DEPT
Sbjct: 367 PFVADGAEIAIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEPT 426
Query: 424 RGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEAD 483
RG+DVG+K EI+ L+ A+G ++I++SSEMPEVL ++DRI+ M+ GRI F + E
Sbjct: 427 RGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEEVT 486
Query: 484 QEKLMACAVG 493
+E L+A G
Sbjct: 487 EENLIAAISG 496
Score = 99.4 bits (246), Expect = 3e-25
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 16/245 (6%)
Query: 257 ISLEVIGLTGSGVH---DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLN 313
+ LE I T GV VS T+ GE+ + G GAG++ LMKV+ G + G I +
Sbjct: 8 LRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIVA 67
Query: 314 GRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHAD--- 370
+ V P D A GI +I ++ L LSV EN+ L L + G+ + A+
Sbjct: 68 EQPVVMSGPLDAKAKGIVFIHQELS---LADELSVAENIYLGELPRKRFGL-VDWAELEA 123
Query: 371 EVIAVDDFIRL-FNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVG 429
+ A+ + +++ FN KT +G+LS NQQ V IA+ L K +I DEPT +
Sbjct: 124 KTNAILEKLKVGFNAKTR-----VGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDA 178
Query: 430 AKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMA 489
K ++++I+ + +G+ I +S M E+ ++DRI V+ +G+ G +E ++E +
Sbjct: 179 EKVVLFEVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQ 238
Query: 490 CAVGR 494
+GR
Sbjct: 239 MMIGR 243
Score = 85.5 bits (210), Expect = 4e-21
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 22 DKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQGQPVSFKGPRDSQLAG 81
+ + V G V+ G GAG++ + + L G+ + +GSI G V+ P D+ G
Sbjct: 273 EDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLRNPTSGSIFLDGAEVAITSPHDAIERG 332
Query: 82 ISIIHQELN---LIPQLTIAENIFLGREMTSPFGRILWDEMHRKA-DQLLARLNVKHSA- 136
IS++ ++ L+ + +N+ L + G + D DQ +L+++
Sbjct: 333 ISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGPFVADGAEIAIFDQYRDKLDIRTPGW 392
Query: 137 KTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNVINELREQGCGIV 196
K L+G LS G QQ + I K LS V+I+DEPT + + N++ +L QG ++
Sbjct: 393 KQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYAVI 452
Query: 197 YISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLEE 245
IS + E+ + D I + G+ + + E+ LI + G E+
Sbjct: 453 VISSEMPEVLHVADRIVAMYSGRIMRTFTSEEVTEENLIAAISGLDTEK 501