Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., ABC transporter from Klebsiella michiganensis M5al

 Score =  411 bits (1057), Expect = e-119
 Identities = 212/489 (43%), Positives = 322/489 (65%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           +L L  I K +    AL+    +++ G V ALMGENGAGKSTLMK+L+G   +D+G I  
Sbjct: 9   LLRLEGISKRYGATLALNNVRFDLFAGEVHALMGENGAGKSTLMKILSGNEQRDSGVIFI 68

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKAD 124
            GQ +  + PRD++  GI+IIHQELN +P +T+AEN+FLG+E TS  G +    MHR+A 
Sbjct: 69  DGQAIDIRTPRDARKYGIAIIHQELNTVPDMTVAENLFLGQEPTSFAGILDRKRMHREAK 128

Query: 125 QLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNV 184
           + L R+N     +  LG LS+G QQMVEIA+A+S  +KV+++DEPT AL+  ET  L+ +
Sbjct: 129 EKLNRINADIDPQAPLGSLSIGRQQMVEIARAVSENAKVLVLDEPTAALSRAETLQLYRL 188

Query: 185 INELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKLE 244
           I ++R+ G G+VYISHR++E++++ + +TV RDG +IG   + + +   ++ MMVGR++ 
Sbjct: 189 IAQMRQDGVGMVYISHRMEEVWQLANRVTVFRDGTWIGTENLGNVSTTDIVRMMVGRQIV 248

Query: 245 EQYPRIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALP 304
           + Y       GD+ LEV  L GS    VSF +  GE++ +SGL+G+GRTE+ ++++GA P
Sbjct: 249 DLYQHEPRTPGDVLLEVRDLAGSATGPVSFEVSAGEVVSMSGLVGSGRTEVARLLFGADP 308

Query: 305 SERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGV 364
             +G + L GR   P  P   +A+GI  ++EDRK  GL LG SV+ N+ + +LD    G 
Sbjct: 309 RSQGSVRLAGRESQPSDPTAAIADGIGMVTEDRKTQGLFLGHSVEHNIDISSLDNFVAGG 368

Query: 365 QIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTR 424
            ++      AV + +R   ++  + E  +  LSGGNQQK A+A+ L+   ++LILDEPTR
Sbjct: 369 VVKRKTIRAAVLEQMRRLRLRENAVELPVSALSGGNQQKAALARWLLRDSRLLILDEPTR 428

Query: 425 GVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQ 484
           GVD+GAK+EIY+LI++    G +I+++SS++PE +G+SDR+LVM  GRI  +  +  A +
Sbjct: 429 GVDIGAKREIYELIDRLARAGKAILVISSDLPEAIGISDRVLVMRGGRIVHQLPSCSATE 488

Query: 485 EKLMACAVG 493
           E++M  A G
Sbjct: 489 EEVMLHATG 497



 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)

Query: 269 VHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLAN 328
           +++V F L  GE+  + G  GAG++ LMK++ G    + GVI ++G+ ++  +P+D    
Sbjct: 25  LNNVRFDLFAGEVHALMGENGAGKSTLMKILSGNEQRDSGVIFIDGQAIDIRTPRDARKY 84

Query: 329 GIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPS 388
           GIA I ++      V  ++V EN+ L        G+  R      A +   R+     P 
Sbjct: 85  GIAIIHQELN---TVPDMTVAENLFLGQEPTSFAGILDRKRMHREAKEKLNRINADIDPQ 141

Query: 389 REQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSI 448
               +G+LS G QQ V IA+ +    KVL+LDEPT  +      ++Y+LI Q + +G+ +
Sbjct: 142 AP--LGSLSIGRQQMVEIARAVSENAKVLVLDEPTAALSRAETLQLYRLIAQMRQDGVGM 199

Query: 449 ILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494
           + +S  M EV  +++R+ V  +G   G           ++   VGR
Sbjct: 200 VYISHRMEEVWQLANRVTVFRDGTWIGTENLGNVSTTDIVRMMVGR 245