Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., D-ribose transporter ATP-binding protein from Klebsiella michiganensis M5al

 Score =  471 bits (1211), Expect = e-137
 Identities = 247/493 (50%), Positives = 344/493 (69%), Gaps = 3/493 (0%)

Query: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60
           M    L    I K FPGVKALD  SL V PG V ALMGENGAGKSTLMK L GIY  D G
Sbjct: 1   MNAFALEAEGISKFFPGVKALDNVSLRVRPGTVHALMGENGAGKSTLMKCLIGIYRPDKG 60

Query: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMH 120
           +I  +G+PV F+   D+  +GIS+IHQELNL+P +T+AENI+LGRE    +G +   ++ 
Sbjct: 61  AIRVKGEPVQFQDTMDALRSGISMIHQELNLVPHMTVAENIWLGREPMK-YGFVDHRQLA 119

Query: 121 RKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETES 180
           R+   LL +LN++ SA  L+GELS+  QQMVEIAKA+S+ + ++IMDEPT ALT++E   
Sbjct: 120 RQTQDLLDKLNIRLSADRLVGELSIASQQMVEIAKAVSWNADIVIMDEPTSALTESEVAH 179

Query: 181 LFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVG 240
           LF +I +LR+QG  I+YISH++ EIF I D+I+V RDG ++G  +  +     LI  MVG
Sbjct: 180 LFTIIRDLRQQGKAIIYISHKMDEIFAITDEISVFRDGTWVGSKQTTEFTRQSLITQMVG 239

Query: 241 RKLEEQYPRIAAQQGDISLEVIGLTGSGV-HDVSFTLKKGEILGVSGLMGAGRTELMKVI 299
           R+L + +P+     G+  L V  L+  G  HD++F++++GEILGV+GL+GAGR+E+M+ +
Sbjct: 240 RELTQLFPKFNNAIGEEVLTVRNLSRKGAFHDINFSVRRGEILGVAGLVGAGRSEVMESL 299

Query: 300 YGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQ 359
           +G   ++ G + ++G  VN  SP   +  G+A ++EDRK  GL L LSV ENMS+  + +
Sbjct: 300 FGMEKADSGEVLIDGMPVNIDSPSTAIEKGMALLTEDRKKSGLFLVLSVLENMSIVKMPE 359

Query: 360 -LSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLI 418
            + K   ++H        + IR  NIKTP+ +QII NLSGGNQQKV IA+ L+ +PK+LI
Sbjct: 360 YIGKTGFVQHLKMAEDCMEQIRRLNIKTPTMDQIINNLSGGNQQKVLIARWLLAQPKILI 419

Query: 419 LDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFM 478
           LDEPTRG+DVGAK EIY LI++    G+++I+VSSE+PE+LGMSDR++VMHEGRI+G   
Sbjct: 420 LDEPTRGIDVGAKAEIYHLISELANRGVAVIMVSSELPEILGMSDRVMVMHEGRITGILD 479

Query: 479 ASEADQEKLMACA 491
             +ADQE +++ A
Sbjct: 480 KEDADQETILSLA 492



 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 6/224 (2%)

Query: 271 DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGI 330
           +VS  ++ G +  + G  GAG++ LMK + G    ++G I + G  V      D L +GI
Sbjct: 23  NVSLRVRPGTVHALMGENGAGKSTLMKCLIGIYRPDKGAIRVKGEPVQFQDTMDALRSGI 82

Query: 331 AYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSRE 390
           + I ++     LV  ++V EN+ L   + +  G  + H        D +   NI+  S +
Sbjct: 83  SMIHQELN---LVPHMTVAENIWL-GREPMKYGF-VDHRQLARQTQDLLDKLNIRL-SAD 136

Query: 391 QIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIIL 450
           +++G LS  +QQ V IAK +     ++I+DEPT  +       ++ +I   + +G +II 
Sbjct: 137 RLVGELSIASQQMVEIAKAVSWNADIVIMDEPTSALTESEVAHLFTIIRDLRQQGKAIIY 196

Query: 451 VSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494
           +S +M E+  ++D I V  +G   G    +E  ++ L+   VGR
Sbjct: 197 ISHKMDEIFAITDEISVFRDGTWVGSKQTTEFTRQSLITQMVGR 240