Pairwise Alignments

Query, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

 Score =  457 bits (1177), Expect = e-133
 Identities = 245/500 (49%), Positives = 336/500 (67%), Gaps = 4/500 (0%)

Query: 5   ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
           ++++ ++ K FPGV+AL +    +  G V ALMGENGAGKSTLMK+L G+Y++D G I Y
Sbjct: 4   LISVKRLSKRFPGVRALHEVQFELVAGEVHALMGENGAGKSTLMKILAGVYTRDTGEILY 63

Query: 65  QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRIL-WDEMHRKA 123
           +GQPV F+ PR++Q  G+ IIHQEL L+  LTIA+N+F+GRE     G  L  D+++ +A
Sbjct: 64  EGQPVDFQSPREAQAVGVGIIHQELQLMNHLTIAQNMFIGREPRGRLGLFLDEDKLNAQA 123

Query: 124 DQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183
             +LAR++V    + L+  L++  QQMVEIAKALSF+S+V+IMDEPT AL D E   LF 
Sbjct: 124 HDILARMHVTLDPRALVSSLTVARQQMVEIAKALSFDSRVLIMDEPTSALNDAEIAELFR 183

Query: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKL 243
           +I +L+++G GI+YISH++ E+ +I D +TVLRDG+++    V DT    +I MMVGR L
Sbjct: 184 IIRDLKKRGVGIIYISHKMDELKQIADRVTVLRDGEYVATVAVKDTTVQAIIGMMVGRTL 243

Query: 244 EEQYP-RIAAQQGDISLEVIGL-TGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYG 301
            +  P +  A QG+++LEV  L  G  V DVSF L+KGEILG +GLMGAGRTE+ + ++G
Sbjct: 244 TDAAPSQHIANQGEVALEVTRLNAGPLVRDVSFALRKGEILGFAGLMGAGRTEVARAVFG 303

Query: 302 ALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQ-L 360
           A P E G I + G      +P D +A GI Y+SEDRK  GL  G+SV+ N+ +  L + L
Sbjct: 304 ADPIESGEIVVKGVKATIRNPSDAVARGIGYLSEDRKRFGLATGMSVESNIVMSNLRKFL 363

Query: 361 SKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILD 420
           S    +R          FI L  I+TPS  Q +  LSGGNQQK+ IAK L     VL  D
Sbjct: 364 SLNFFLRRTQIRKTAAHFINLLAIRTPSATQEVRLLSGGNQQKIVIAKWLERDCDVLFFD 423

Query: 421 EPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMAS 480
           EPTRG+DVGAK EIY+L+     +G +I+++SSE+PE+L MSDRI+VM EGRI+GE  A+
Sbjct: 424 EPTRGIDVGAKSEIYKLLRSLADQGKAIVMISSELPEILRMSDRIVVMCEGRITGELAAA 483

Query: 481 EADQEKLMACAVGRNPAHAA 500
            A QE++M  A  R P + A
Sbjct: 484 GATQERIMQLATQREPLNVA 503