Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 941 a.a., Rhs element Vgr protein from Dechlorosoma suillum PS

 Score =  203 bits (516), Expect = 5e-56
 Identities = 160/565 (28%), Positives = 258/565 (45%), Gaps = 74/565 (13%)

Query: 7   QLKVDGLEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQTAH 66
           +L+V G+  E L+     G+ES+S           +R +V   S  ++L  +Q + + A 
Sbjct: 26  ELRVLGVGSEELLPVEARGEESVSGD---------YRVEVGCLSPDTHLELKQLIGRIAE 76

Query: 67  LTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEI 126
           L +L      + I+G++ +          + ++L +VP L  L+ R+NSR+FQ +SVPEI
Sbjct: 77  LNLLLADGGHKTISGLIAEARHEGADGGFSRFALVIVPGLSLLTHRTNSRVFQDKSVPEI 136

Query: 127 ISILLQEMGIEDYAFA--------LKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHL 178
           +  LL E       +A        L ++  QR +C+QYRE+D  F+ R+ AEEG+   + 
Sbjct: 137 VHTLLSEHRDAGGPWAAACRWQNRLAKDYPQRSYCLQYRESDRDFIRRLLAEEGIATRYE 196

Query: 179 HEAQK------------HTL-LFTDSSDSQPKLAKPVPYN-ALAGGEINLPYVVDLQFKT 224
            + +             HTL LF D  +  P   + + ++ A A  E +     D   + 
Sbjct: 197 FQEEDSSGQRQDDATPLHTLVLFDDPYEPTPAQQEKIRFHRADASEEADSLTAWDTARRL 256

Query: 225 TAQVSHTELKDYSFKKPAYGFTQRT--QGKDIAYQQPNYEHFDAPGRY--KDDANGKAFS 280
            +  S     DY    P       T  QG+     +   E +D    Y   D+ +   ++
Sbjct: 257 RSGKSQLLAWDYKPVTPLQADAPGTTDQGEQGGQVESRLEAYDPQAHYYGADNDDLSRYT 316

Query: 281 QIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDHAMNRD----WLV----------- 325
           Q+R +   R A     +S    L AG  F L+DH  H    D    +LV           
Sbjct: 317 QLRQDSRDRAAKDYQGQSSVRGLTAGQWFQLEDHPRHEGEDDDSRRFLVRHLNWHARNNL 376

Query: 326 ----------VQANHQGTQPQALQEEGGSGATTYSNQLKLI--PAHITWRARPCAKPQVD 373
                     + A+  G    A    G +G   Y N    +     I     P  KP   
Sbjct: 377 PGDLTDGLPGLLASAAGQHGTASDAAGATGDQPYRNTFTAVRRDTPIAPDYAPYQKPTAK 436

Query: 374 GPMIATVVGPQGEEIYCDNFGRVKVHFPWDRY-------SSSNEKSSCWVRVAQEWAGSQ 426
           GP  ATVVGPQGEEI+ D+ GR+K+ F W R        ++ +++SSCW+RVA  W G+ 
Sbjct: 437 GPQTATVVGPQGEEIHTDDLGRIKIQFHWAREQDHPDGGAALDDRSSCWIRVAVPWGGAN 496

Query: 427 YGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPY-----ALPDHKTKTVLRTET 481
           +G   +PR+G EV+V FL GD D+P++    Y+ ++  P      +LP ++T   ++++ 
Sbjct: 497 WGHQYLPRIGQEVLVEFLEGDIDRPVVMAGLYNGSHRPPTYSGAGSLPANRTLAGIKSKE 556

Query: 482 HQGQGYNELSFEDQAGSEQILLHAQ 506
           ++G GYNEL F+D  G  +  L ++
Sbjct: 557 YKGNGYNELLFDDSTGELRAKLSSE 581