Pairwise Alignments

Query, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., type IV secretion protein Rhs from Klebsiella michiganensis M5al

 Score =  288 bits (736), Expect = 1e-81
 Identities = 180/541 (33%), Positives = 271/541 (50%), Gaps = 75/541 (13%)

Query: 66  HLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPE 125
           HLT   +      +    RQL       R+ F    L P L  L+L SN+R+FQ  +  E
Sbjct: 50  HLTTTINNADYDGLIAEARQLPATSNADRYQF---VLRPWLWWLTLSSNNRVFQNLNAQE 106

Query: 126 IISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHT 185
           I+  + ++ G  DY F LK + A+RE+C+QY+E+D  F+ R+  +EG+ +   H+  KHT
Sbjct: 107 IVEKVFKDGGFTDYKFQLKSKPAKREYCLQYKESDFNFVSRLLEQEGIFWFFTHKEGKHT 166

Query: 186 LLFTDSSDSQPKLA--KPVPYNALAGG--EINLPYVVDLQFKTTAQVSHTELKDYSFKKP 241
           L+  D + + P +   K V Y A   G  E  +     L+ + TAQ +H           
Sbjct: 167 LVLADDNSACPPIPGEKKVKYQAAQNGGRETGMIRSAQLRLQATAQGAH----------- 215

Query: 242 AYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEP 301
                                    PG  K +   +   +                SD P
Sbjct: 216 -------------------------PGNDKSEQPKQLIGE----------------SDCP 234

Query: 302 LLLAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHIT 361
            L+AG  F L DH D A N DWL+   +         QE  G     Y N+   IP    
Sbjct: 235 ALMAGHWFTLADHDDKATNIDWLITTVS---------QEYDGE---RYRNRFTAIPKATP 282

Query: 362 WRARPCAKPQVDGP-MIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQ 420
           +   PCA P+   P   ATVVG  GEEI+ D  GRVKV FPW+R   ++E  SCW+RVA 
Sbjct: 283 YHP-PCATPKPFMPTQTATVVGKNGEEIWTDKLGRVKVQFPWEREGKNDEIGSCWLRVAT 341

Query: 421 EWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTE 480
            W+G+ +G+  IPR+G EV+VSF++GDPD+P+ITG  Y+  N  PYALP ++T++ ++  
Sbjct: 342 AWSGNGFGAQFIPRIGQEVVVSFIDGDPDKPLITGCVYNGANALPYALPANQTQSGIK-- 399

Query: 481 THQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRN 540
           TH  QG+NEL F+D+  +E + + AQKD+   + +D T ++ HD+ L+V N R   ++ +
Sbjct: 400 THSEQGFNELRFDDKKDAELLAMQAQKDFQVTVLNDSTTIVGHDEILSVKNKRSVTVKGD 459

Query: 541 QHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLK 600
           Q   ++G    K+  + +  V  +L  KV   + +E+GK + +KSGA +   A   + L 
Sbjct: 460 QEHAIDGNETHKVKGNYTLNVDGNLTIKVSGTLTLESGKTLDIKSGAGLNASASGSMKLD 519

Query: 601 A 601
           A
Sbjct: 520 A 520