Pairwise Alignments

Query, 1181 a.a., type VI secretion system membrane subunit TssM from Vibrio cholerae E7946 ATCC 55056

Subject, 1206 a.a., hypothetical protein from Enterobacter sp. TBS_079

 Score =  329 bits (843), Expect = 1e-93
 Identities = 301/1212 (24%), Positives = 510/1212 (42%), Gaps = 112/1212 (9%)

Query: 31   LNVAIWWAGPWLEVAGYKPLESIMARVVASS----LFTLGCLA--VWGIWQWRKLQAFKS 84
            L   IW  GP L +   +PLES   R+++ +    L+  G +   ++  W  RKL    +
Sbjct: 23   LAAVIWMIGPLLSIVDTRPLESEQNRIISIAVVYLLWAQGHILPRLYNAWLNRKLMDKLN 82

Query: 85   EQKREEQLRQDPIKVYEQRQEVELNQVMLNMKQSLNKH----------------NYLYAL 128
            E     +   DP K     +++  ++     +     H                 YLY L
Sbjct: 83   ENTTSPEAA-DPQKRLNSEEQILASRFDEAAQMLKKAHFSKAGQGAQWTQRFSTQYLYQL 141

Query: 129  PWYLVLGLENAGKTSLINRSGQNFVFSSVMRASGQKS-ENPYSFDWWIGDESVLIDPDGE 187
            PWY+++G   +GKT+ +  SG  F  +     +  +      + DWW  +E+VL+D  G 
Sbjct: 142  PWYVIIGAPGSGKTTALVNSGLQFPLADRFGKTALRGIGGTRNCDWWFTNEAVLLDTAGR 201

Query: 188  LLTQGNRSEENDGALERRLWLHFVDWLDRTRSRRPLNGIVLALDVAHLATATASERKAYA 247
              TQ +   ++ G      WL F+  L + R R+P+NG+++ + ++ L T +    +  A
Sbjct: 202  YTTQESEQVQDAGE-----WLEFMGLLRKYRRRQPINGVIITISISDLLTLSPEASRQQA 256

Query: 248  NLLRARLRELMETLSTRLPVYIALTKLDLLHGFEPFFKHYTKSQREEVLGFTFSMDSVDN 307
              LR RL EL E L  R PVY+ +TK DLL GF  +F  Y K+QR+++ GFT   +   +
Sbjct: 257  VNLRQRLSELHEQLGIRFPVYVMVTKADLLKGFHAWFADYDKAQRDQIWGFTLPWEQTKH 316

Query: 308  LD-SWLEEFASEYTQFVSRVNGMLPHAVAAPMTLEERNAIYSFTRQISGLKEILQQFFQE 366
             D   +  F  E++    R++  LP  +      + R   Y F ++ + L+ +L  +   
Sbjct: 317  ADYDLMGNFQQEFSLLQQRLDAGLPETLLQEHDAKARAEAYLFPQEFAALRPLLADYLST 376

Query: 367  ALASDQFSTSALVRGAYFTSVYQQGVPTNAFDDAASRRYGL----------SHAINTAQR 416
              A   F T    RG YF S  Q+G+P +      +R   L          S +      
Sbjct: 377  VFARSNFETEFSPRGIYFASGTQEGMPFDRVMGELNRALSLPEGEEGNRWDSVSKEAPIP 436

Query: 417  AKNSTVYFTQKLFTHIIYPEAGLASDNFRVAKNKRRLMGLSFVACSVATLLLAGTWHRNY 476
                  +F + L  ++I+ EAG+A +N       R ++   + A     ++L G W  +Y
Sbjct: 437  GAKGQSFFIKNLLQNVIFQEAGIAGENRWWELRNRAVIWSGYAALLALLVILGGLWLTSY 496

Query: 477  LNNVQHADTVLTKVNQYKEQFPTSRSLASQR-----EVLDPLNKIREATLEFGFFRDKPQ 531
              N  + + V  KV    +Q   S++L +Q      ++L  LN + +      F  ++P 
Sbjct: 497  ARNKAYLEEVDAKVPLLDQQ---SKALQNQPQRDLFDLLPLLNGLVDLPKSDAFDVNEPP 553

Query: 532  YISDFGLYQGHTIGPKVEETYLNLLETRFLP-LLMADTIVALNQAETD-EEKLAVLRVYR 589
                 GLY+G  +    +  Y   L+   LP + M  T    N   +D E     L+ Y+
Sbjct: 554  VSRRMGLYRGDDVSDASQSLYQKALDQMLLPAVAMHITTWLRNDNGSDVEYSYESLKAYQ 613

Query: 590  MLVDKSGRYQDYVMDYFAKYWQKSFSGQRQIQEELLGHLDYAMRHTDLTAERLNGDKGAE 649
            ML         ++  +     Q++    + + +  L  L++ +  T L   ++     A+
Sbjct: 614  MLYQPKHYDGKFLHSWVMLNLQRNL--PQNVTQAQLQQLEWHL--TQLLEPKIQASPYAQ 669

Query: 650  QVMRPYDKVIARAQVELGSMPNDQRVYRNLK--LSAQTVLGPSVNLRSLIGPVFDVVFEE 707
                  + ++AR +  +   P   RVY  LK  L     L P V+L  L GP  ++VF  
Sbjct: 670  D-----ESLVARERALINQQPLSTRVYGRLKRLLEHDENLKP-VSLSDLGGPQSELVFSR 723

Query: 708  RVLNSSSLFIPQMLTKRGFDDYFMPQSESV-SELALIDSWVLGQSKTAQFSEADKQALRE 766
            +     S  +P + T  G+   F  Q +SV + L   D+WVLG    A  ++ DKQ +  
Sbjct: 724  KSGKPVSEGVPGLYTPDGYWKSFNGQIDSVTTALHEDDAWVLG----ATSAQEDKQQIDN 779

Query: 767  KIRDLYVADYTNTWRAALNEIDVKYFNDINDAVMVLENITSNLEPMQRLLRTLDDNTQLY 826
             +R LY+ D+   W   L +I +    D++  +     ++    P++RL+  L     L 
Sbjct: 780  AVRQLYMRDFIANWDRFLADIQLNNSADLSQRINTARLLSGANSPLRRLVLNLSQVLTLS 839

Query: 827  SALPKDESALKELLKSPK----------------YKVASMIETP-------FADLNGMLK 863
               P  + A K   +S +                 + A + + P       +A +  + +
Sbjct: 840  RNAPAPDDAGKAQAQSNRATRTLEALFSNNDNAPTQAAVVTQAPEQLVTDHYAPMIELAQ 899

Query: 864  PV--GSKPAYMTEVLASVDELKSYLKSIQDAPDVGMAALDATKARVKLVNADPIYTLKRI 921
            P+  G K     + L  VDEL  YL ++QDA + GM A             + I  L+  
Sbjct: 900  PLEKGGKTIVFDDFLKQVDELYRYLTAVQDAANSGMPA----------PGGEAISRLQAS 949

Query: 922  SSGLPKPLDSMMAKLADESWYVVKQEAIKHLEVRWTEDVYKTFQSKLAGRYPFNPASNKD 981
            +  LP  L +M + +A  +    ++  ++++  R   +V    +  +AGRYP   +++ +
Sbjct: 950  AGRLPGGLQTMFSNMAVGASSDTQRRDLENVRKRINVEVGGFCRQAIAGRYPLVRSASTE 1009

Query: 982  VALADFEAFFAP-NGTLDNFYNQQLKMFIDENIS----VASDDSAQSIIRKEVLDQIKQA 1036
            V   D    FAP  G +D F+   L   +D   +    +   D       + +L   +QA
Sbjct: 1010 VTPDDLARMFAPGTGLMDTFFRDNLTNKVDTTQANWRFMPGIDGKTLPGSEGLLRPFQQA 1069

Query: 1037 QKIREAFF-NRKGILDVSFSVEPLSLSNNKRRSVLNVDGQFLAYSHGPRENVELIWPNTL 1095
            Q IR+AFF N         +V  + + N      L+VDGQ L YSHGP+    + WP   
Sbjct: 1070 QSIRDAFFANGATTPSYKVTVRTVRMDNTILNLTLDVDGQLLRYSHGPQAVQIMNWPG-- 1127

Query: 1096 RDSAVSKVTLIPTQTNMSPRSLQIQGPWAFFRLLDQGDV-VSASQTSVDFKFIVDGGEMI 1154
                 ++V +     N S  +L   G WA  R  D+      A   S    F VDG ++ 
Sbjct: 1128 -PGGTNQVRMQLGLANGSTATLVTNGSWALNRFFDKARTSPGAGSLSRQATFNVDGHQVT 1186

Query: 1155 YRINAEADANPF 1166
                  +  NPF
Sbjct: 1187 LEFAPNSIRNPF 1198