Pairwise Alignments

Query, 469 a.a., type VI secretion system protein TssA from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Uncharacterized protein ImpA from Pseudomonas fluorescens FW300-N2E2

 Score =  123 bits (309), Expect = 1e-32
 Identities = 111/481 (23%), Positives = 203/481 (42%), Gaps = 35/481 (7%)

Query: 6   YRQCVAKPISSSNPVGERLVDHPLFDFIEDQMMKVGSLSHAS-VQWDEVEHSTLKLLGEQ 64
           Y      PIS     G  +     ++ +E ++ K  S+  +  V W ++   +  LL  Q
Sbjct: 11  YLALAKAPISKERFAGADVRFSNEYEALESELGKAQSMHESGQVDWLKIREGSEVLLRSQ 70

Query: 65  SKDIKLLVYLLQCLHNQVTPTRLITSFAVMSEFLNQYWNDSYPAPGPRGNLPRRKFFSQM 124
           SKD+++  +L+  L+ + +   L+   +++      +W D +P      N  R    + +
Sbjct: 71  SKDLRVAAWLVWALYQRESFQGLLAGLSLLHHLCKNHWPDIHPIK----NRTRAASINWL 126

Query: 125 AQRFTTVI-------EKFD-FHHLDEADRQALQAAVEEWQQAVEKQGLSSELVESVVVRI 176
             R    +       E+   F HL E   + L              G  + L+  +  R+
Sbjct: 127 VPRLEQALGDDIAIKEQLPLFRHLTE-QLEGLDTV------CTAHLGDDAPLLLPLCRRL 179

Query: 177 TAEIKRA-EQRQQVTAQSSAERETPSAATP-----SPAASMVVDHSSDKAAKQTLLKVAD 230
              I+RA +   Q  A  +   +    A+      +P  +    H + +A ++    +  
Sbjct: 180 NTMIQRATDNLPQAGAIGTVVAQVKQVASQLLMPGAPIENEKEAHKALRAQQENAGSLCS 239

Query: 231 FLAEQEFGIALSIRLRRFAVWGSITSLPDHKPDGETLLRGMQADRVKDYQDQLRHPDLA- 289
           +  +Q+     ++RL R   W +I  +P+   +  T LRG+ AD++K YQD L   D A 
Sbjct: 240 WWLKQKATDVRALRLNRTLTWLTIDVMPERNAEQITQLRGVPADKLKTYQDSLHQGDYAN 299

Query: 290 LWRKVEQSLTMAPYWFEGQWMSYTIAQQLGKSDWCQAIAEETQQFLRRLPSLLELKFKGG 349
           L  ++E SL  AP+W +GQ +++   Q L        +      F++RLP ++EL++  G
Sbjct: 300 LLVEIEASLAKAPFWLDGQRLAWECLQGLNAELAMGEVEVHFALFIQRLPGVIELRWHDG 359

Query: 350 EPFVSDSVKEWLASVG----QSQGAAGQ----SVGGDWQEKRKEAFQLAKEGGIAVALSM 401
            PF   + + W+AS      Q  G A +         W+   +EA  +    G+  A+ +
Sbjct: 360 TPFADPATRAWIASQVMPHLQKPGTAPEIDTTHNDAPWELTLEEAQSILSTDGLKPAVQL 419

Query: 402 LNDGLVSAVEPRDKFYWRLLSADLLRANHLDAMAGEQYQTLLNQVTTLSVPEWEPSLVEQ 461
           L  G+ +A   R+ F WR   A L  +     +A  Q + L   +    +  WEP+L  Q
Sbjct: 420 LKQGMQNARGARECFLWRFAMARLCFSARKYELAKVQLEVLDQTLQHAGLNTWEPTLELQ 479

Query: 462 I 462
           +
Sbjct: 480 V 480