Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Type IV fimbriae expression regulatory protein PilR from Pseudomonas fluorescens FW300-N2E2

 Score =  225 bits (573), Expect = 3e-63
 Identities = 135/357 (37%), Positives = 195/357 (54%), Gaps = 25/357 (7%)

Query: 169 LKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKE 228
           L++ +T   R     +    L R+L+G+S  M  +R+QI   A SQ  V + GE+G GKE
Sbjct: 114 LRELVTSALRLPPVATPGTTLERSLLGDSPPMLSVRKQIEKLARSQAPVYISGESGCGKE 173

Query: 229 LVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGT 288
           LVA  +HE   R + PFV +NC AIP  L+ESE FG+ KG+FSGA  DK GL   A+GGT
Sbjct: 174 LVARLIHEQGPRANLPFVPVNCGAIPTELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGT 233

Query: 289 LFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQ 348
           LFLDE+ D+PL +Q KLLR ++ +  R +GG+QE   D R++ ATH +L  +V    FRQ
Sbjct: 234 LFLDEVADLPLAMQVKLLRAIQEKAVRAVGGQQEEVVDVRILCATHKDLDGEVAAGRFRQ 293

Query: 349 DLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPG 408
           DLYYRL    + +P L  R EDIELL+ H ++       +    L+ +A+D L+ Y FPG
Sbjct: 294 DLYYRLNVIELRVPPLRERREDIELLANHMLQRLAANTGSPPVKLHPQALDALRSYRFPG 353

Query: 409 NVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVA 468
           NVREL++++E                   R  TL C   +     + +   N   EP   
Sbjct: 354 NVRELENMLE-------------------RAYTL-CEQQQIEADDLRLAEGNGSAEP--- 390

Query: 469 LAGEPNFAVIHDLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKL 525
             G P+   + +L+  +   E  +I + L     +R  AA+ L +  R++ Y+  KL
Sbjct: 391 --GNPDLMQVDNLEDYLEDVERKLILQALEETRWNRTAAAQRLKLSFRSMRYRLKKL 445