Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N2E2

 Score =  223 bits (567), Expect = 2e-62
 Identities = 158/427 (37%), Positives = 227/427 (53%), Gaps = 32/427 (7%)

Query: 107 SVWIQPLPMDTRQVHSILLLMGESHGI-VSAFENADFLKFIEVFSQQWSLLNDMEREEQR 165
           S W + LP+         LLMGE+  + +   +    L  +E+      LL+ + R +  
Sbjct: 74  STWDEFLPV---------LLMGENSSLDLPEDQRRRVLSTLEMPPSYSKLLDSLHRAQVY 124

Query: 166 RLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGT 225
           R      + D  R+  +    N L R+L+G S A+Q +R+ +   A++  SV++ GE+GT
Sbjct: 125 R-----EMYDQARERGRHREPN-LFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGT 178

Query: 226 GKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQAN 285
           GKE+VA  +H  S R+ APFV +NC AIP  LLESELFG+ KGAF+GA + + G    AN
Sbjct: 179 GKEVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELAN 238

Query: 286 GGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKE 345
           GGTLFLDEIGDMPL +Q KLLRVL+ RTF  +G  +  S D R+++ATH NL   +    
Sbjct: 239 GGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGS 298

Query: 346 FRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYD 405
           FR+DLYYRL  +PI +  L  R+EDI LL    +     +    IR  N  AI  L ++ 
Sbjct: 299 FREDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIR-FNSAAIMSLCRHG 357

Query: 406 FPGNVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEP 465
           +PGNVREL +L+E        G  +  +    + + +     +       V++   DLE 
Sbjct: 358 WPGNVRELANLVERMAIMHPYGV-IGVNELPKKFRYVDDEDEQ------MVDSLRSDLEE 410

Query: 466 SVALAGE-PNFAVIH-------DLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRT 517
            VA+ G  P+F           DLK  +   E  +I + L+   G  A+AA+ L I + T
Sbjct: 411 RVAINGHTPDFTANALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTT 470

Query: 518 LAYKCLK 524
           L  K  K
Sbjct: 471 LVEKMRK 477