Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N2E2

 Score =  217 bits (553), Expect = 6e-61
 Identities = 144/354 (40%), Positives = 205/354 (57%), Gaps = 46/354 (12%)

Query: 171 QSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELV 230
           + LT +   SA+ S     +  L+G S A  +   ++   A S L V++ GE+GTGKEL 
Sbjct: 97  ERLTQVRSASARPS-----NEGLVGSSPAFNQALLELQRVAPSMLPVLLLGESGTGKELF 151

Query: 231 AAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLF 290
           A AVHE S R + PFV ++C+ + E L ESELFG+ KGAF+GA + K GL+  A GGTLF
Sbjct: 152 ARAVHETSERAAGPFVVVDCSGLTETLFESELFGHEKGAFTGATTRKVGLVETAQGGTLF 211

Query: 291 LDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDL 350
           LDEIGD+PL +Q KLLR++ES T+R +G  +   +DFRLV+ATH  L   V K EFRQDL
Sbjct: 212 LDEIGDVPLAMQVKLLRLIESGTYRRVGSVETQHADFRLVAATHKPLEKMVEKGEFRQDL 271

Query: 351 YYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNV 410
           YYR+  +PI LP L  RLEDI LL + F++   +    R   ++  A+  L+++ +PGN+
Sbjct: 272 YYRISVFPIHLPPLRHRLEDIGLLVDSFLQRSGI--GKRRLTIDPEALMQLQRFAWPGNI 329

Query: 411 RELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALA 470
           REL++++E       DG         H L  LP     A P+A+S         P++  A
Sbjct: 330 RELRNVLERAALFADDGV-------IHALH-LP-----APPLALSA--------PALTPA 368

Query: 471 GEPNFAVIHDLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLK 524
            +       DL+Q V+ F+            G R++ A+ LG+ +RTL Y+ LK
Sbjct: 369 RDS-----RDLEQLVATFK------------GTRSELARHLGVSERTL-YRRLK 404