Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  220 bits (560), Expect = 1e-61
 Identities = 133/333 (39%), Positives = 187/333 (56%), Gaps = 25/333 (7%)

Query: 193 LIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAA 252
           L+G S  M+ LR+QI   A SQ  V + GE+G+GKELVA  +HE   R    FV +NC A
Sbjct: 154 LLGGSPPMKVLRKQIGKLARSQAPVYISGESGSGKELVARLIHEQGPRAEKTFVPVNCGA 213

Query: 253 IPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLESR 312
           IP  L+ESE FG+ KG+FSGA  DK GL   A+GGTLFLDE+ D+PL +Q KLLR ++ +
Sbjct: 214 IPSELMESEFFGHKKGSFSGAIEDKPGLFQAASGGTLFLDEVADLPLPMQVKLLRAIQEK 273

Query: 313 TFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDIE 372
             R +GG QE+  D R++ ATH +L  +V    FRQDLYYRL    + +P L  R EDI 
Sbjct: 274 AVRAVGGAQEVMVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIR 333

Query: 373 LLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADGTQVEA 432
           LL++  +R    +    I  L+  A+  L+ Y FPGNVREL++++E       DG +++A
Sbjct: 334 LLADAMLRRLAQECGDSIAHLHPEALAKLESYRFPGNVRELENMLE-RAYTLCDGEEIKA 392

Query: 433 SCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVSQFEALI 492
                RL   P              +EN          GE + A I +L+  + + E  +
Sbjct: 393 GDL--RLADSP------------GSSEN----------GEASLAQIDNLEDHLEEIERKL 428

Query: 493 ISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKL 525
           I + L     +R  AA+ LG+  R++ Y+  KL
Sbjct: 429 IMQALEETRWNRTAAAQRLGLTFRSMRYRLKKL 461