Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  219 bits (558), Expect = 2e-61
 Identities = 141/360 (39%), Positives = 204/360 (56%), Gaps = 33/360 (9%)

Query: 165 RRLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETG 224
           R LE ++   ++ R   Q+ L++     ++G S  M+ L +QI   A ++  V+V GE+G
Sbjct: 120 RALETRRLRDEVRR--FQQLLSDDRFHGMLGRSRVMRGLFDQIRQLARAEGPVLVIGESG 177

Query: 225 TGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQA 284
           TGKELVA AVH  S R + PF+AINCA +P  LLESE FG+  GAF+GA+   +GL  QA
Sbjct: 178 TGKELVARAVHAESERANRPFLAINCAGLPAELLESEFFGHVAGAFTGANRAHKGLFQQA 237

Query: 285 NGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKK 344
           +GGTLFLDEIG+MPL LQAKLLRVL+  T RP+G ++EL+ D R+++A++  L  +  ++
Sbjct: 238 DGGTLFLDEIGEMPLPLQAKLLRVLQEGTIRPVGAERELTVDVRIIAASNRPLETEAGRE 297

Query: 345 EFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQY 404
            FR+DL++RL  + + +P L  R ED+ELL+  FV  F  +    +RGL    +  L++Y
Sbjct: 298 AFREDLFFRLETFILQVPPLRDREEDLELLAAGFVAHFAARSGRPVRGLAPAVLAQLRRY 357

Query: 405 DFPGNVRELKHLIEFGCAQTADGTQVEASCFAH----RLQTLPCLAPEATPVAVSVETEN 460
            FPGNVREL++ IE             A  F H     L+ LP    +            
Sbjct: 358 PFPGNVRELQNAIE------------RAVTFCHGRSIELEHLPSRIADYR---------- 395

Query: 461 VDLEPSVALAGEPNFAVIHD--LKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTL 518
              + +   AG    A + D  L   + + E   I   L    G++ +AA  LGI +RTL
Sbjct: 396 ---DDNARSAGAELLAQLSDGPLLPTLEELELRYIEHVLKLVDGNKRRAAALLGIGRRTL 452