Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  213 bits (542), Expect = 1e-59
 Identities = 137/360 (38%), Positives = 197/360 (54%), Gaps = 3/360 (0%)

Query: 166 RLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGT 225
           R ++ + + D  +   ++   N L R+L+G S A+Q +R+ +   A+++ SV++ GE+GT
Sbjct: 120 RAQIYREMYDQAKSRGRQREPN-LFRSLVGTSRAVQHVRQMMEQVADTEASVLILGESGT 178

Query: 226 GKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQAN 285
           GKE+VA  +H  S R+  PFV +NC AIP  LLESELFG+ KGAF+GA + + G    A 
Sbjct: 179 GKEVVARNLHYHSKRRQGPFVPVNCGAIPAELLESELFGHEKGAFTGAITARSGRFELAE 238

Query: 286 GGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKE 345
           GGTLFLDEIGDMPL +Q KLLRVL+ RTF  +G  +  ++D R+++ATH +L   + +  
Sbjct: 239 GGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNRTQNADVRIIAATHKDLEKMIEEGT 298

Query: 346 FRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYD 405
           FR+DLYYRL  +PI +  L  R+EDI LL    +     +    IR  N  AI  L ++D
Sbjct: 299 FREDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIR-FNSAAIMSLCRHD 357

Query: 406 FPGNVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEP 465
           +PGNVREL +L+E        G                     AT +   +E       P
Sbjct: 358 WPGNVRELANLVERMAIMHPYGVIGVMELPKKFRHVDDDDEQYATSLHDEMEERAAISAP 417

Query: 466 SVALAGEPNFAVIH-DLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLK 524
            V    +    V   DLK+ +   E  +I + L    G  A+AA+ L I + TL  K  K
Sbjct: 418 MVVPEAQAMLPVEGLDLKEYLGNLEQGLIHQALEDAGGVVARAAERLRIRRTTLVEKMRK 477