Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Type IV fimbriae expression regulatory protein PilR from Xanthomonas campestris pv. campestris strain 8004

 Score =  222 bits (566), Expect = 2e-62
 Identities = 133/339 (39%), Positives = 183/339 (53%), Gaps = 24/339 (7%)

Query: 193 LIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAA 252
           L+G+S AM+ LR  I   A SQ  V + GE+G GKELVA  +HE  +R + PF+ +NC A
Sbjct: 123 LLGDSTAMESLRSTIGKVARSQAPVYIVGESGVGKELVARTIHEQGARAAGPFIPVNCGA 182

Query: 253 IPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLESR 312
           IP  L+ESE FG+ KG+F+GA +DK GL   A+GGTLFLDE+ ++PL +Q KLLR ++ +
Sbjct: 183 IPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLDEVAELPLQMQVKLLRAIQEK 242

Query: 313 TFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDIE 372
           + RP+G   E   D R++SATH +L D V    FR DLYYR+    + +P L  R  D+ 
Sbjct: 243 SVRPVGASGETLVDVRILSATHKDLGDLVSDGRFRHDLYYRINVIELRVPPLRERSGDLP 302

Query: 373 LLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADGTQVEA 432
            L+   +      H   I  L   A+D L  Y FPGNVREL++++E   A  A+  Q+ A
Sbjct: 303 QLAAAIIARLARSHGRPIPLLTQSALDALDTYGFPGNVRELENILERALA-LAEDDQISA 361

Query: 433 SCF------AHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVS 486
           S         HRL   P  A      A+      VD++P+ +            L   + 
Sbjct: 362 SDLRLPAHGGHRLAASPGSA------AIEPREAVVDIDPASSA-----------LPSYIE 404

Query: 487 QFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKL 525
           Q E   I + L     ++ K A  LGI  R L YK  KL
Sbjct: 405 QLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKL 443