Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  224 bits (570), Expect = 7e-63
 Identities = 140/346 (40%), Positives = 204/346 (58%), Gaps = 14/346 (4%)

Query: 189 LSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAI 248
           L R+L+G S  +  +R  I   A S  +V+V G++GTGKE+VA  +H LS R+  PF+ +
Sbjct: 129 LFRSLVGRSEGIVNVRHLISQVAPSDATVLVLGQSGTGKEVVARNIHYLSERRDGPFIPV 188

Query: 249 NCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRV 308
           NC AIP  LLESELFG+ KG+F+GA S ++G    A GGTLFLDEIGDMPL +Q KLLRV
Sbjct: 189 NCGAIPPELLESELFGHEKGSFTGAISSRKGRFELAEGGTLFLDEIGDMPLAMQVKLLRV 248

Query: 309 LESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARL 368
           L+ R F  +GG + + ++ R+V+ATH NL + +   EFR+DL+YRL  +PI +P L+ R 
Sbjct: 249 LQERVFERVGGSKPIQANVRVVAATHRNLENMIENNEFREDLFYRLNVFPIEMPSLSERC 308

Query: 369 EDIELLSEHFV-RVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADG 427
           EDI LL +  V RVFN +   ++R    RAI+ LK++D+ GNVREL +L+E        G
Sbjct: 309 EDIPLLLQELVSRVFN-EGRGKVR-FTQRAIESLKEHDWSGNVRELSNLVERLTILYPGG 366

Query: 428 -TQVEASCFAHRLQTLPCLAPEATP--------VAVSVETENVDLEPSVALAGEPNFAVI 478
              V      +R   +P    E +          ++  + E V++  +   +  P   V 
Sbjct: 367 LVDVNDLPVKYRHIDVPEYCVEVSEEMLERDALASIFNDDEPVEIPETRFPSELPPEGV- 425

Query: 479 HDLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLK 524
            +LK  +++ E  +I + L +     A+AA+ LGI + TL  K  K
Sbjct: 426 -NLKDLLAELEIDMIRQALEQQDNVVARAAEMLGIRRTTLVEKMRK 470