Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  221 bits (564), Expect = 3e-62
 Identities = 122/246 (49%), Positives = 167/246 (67%), Gaps = 1/246 (0%)

Query: 173 LTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAA 232
           L +  R  A+   A  L+  +IGESAA+Q + + +   A++ ++V++ GE+GTGKE+ A 
Sbjct: 130 LEEENRQLARAGHAGPLAN-VIGESAAIQAVCQMVRRVASTTVNVLLLGESGTGKEVFAH 188

Query: 233 AVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLD 292
           ++H+LS R   PFVAINCAAIPE+LLESELFG+ KGAF+GA     G I QANGGTLFLD
Sbjct: 189 SLHQLSGRAGQPFVAINCAAIPENLLESELFGHEKGAFTGALRQTTGKIQQANGGTLFLD 248

Query: 293 EIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYY 352
           EIGDMP  LQAKLLR L+SR    +GG+Q L  D R+VSAT+ +L   + K EFR+DLYY
Sbjct: 249 EIGDMPPPLQAKLLRFLQSRVIERVGGRQSLEVDVRIVSATNRDLGALIEKGEFREDLYY 308

Query: 353 RLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRE 412
           RL +  I LP L  R+ED  LL+++F+  F      ++ G +  A   L  + +PGNVRE
Sbjct: 309 RLDEVKIALPPLRDRIEDAPLLAQYFLDSFAASMGRKVTGFSSDAQVALSAHPWPGNVRE 368

Query: 413 LKHLIE 418
           L++ ++
Sbjct: 369 LENRVK 374