Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., Transcriptional Regulator, NifA, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  215 bits (547), Expect = 4e-60
 Identities = 116/271 (42%), Positives = 175/271 (64%), Gaps = 6/271 (2%)

Query: 147 EVFSQQWSLLNDMEREEQRRLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQ 206
           +  S +  ++ D +R  + +  L+++L   E+      L   +   ++G S+AM K+  Q
Sbjct: 180 QTVSLERRVVGDRDRLIEEKARLEKALPKREKP-----LKGTILENVVGRSSAMMKISAQ 234

Query: 207 IVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYC 266
           +   A S+ +V+++GE+GTGKEL+A A+H LS R   PF+ +NCAA+PE LLESELFG+ 
Sbjct: 235 VRQIAPSRATVLLRGESGTGKELIAQAIHYLSPRSDKPFIKVNCAALPETLLESELFGHE 294

Query: 267 KGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSD 326
           KGAF+GA ++++G    A+GGTLFLDEIG++ +  QAKLLRVL+   F  +GG + +  D
Sbjct: 295 KGAFTGATTERKGRFEMASGGTLFLDEIGEITVHFQAKLLRVLQEGEFERVGGGKTIKVD 354

Query: 327 FRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQH 386
            RLV+AT+ +L D V + EFR DLYYR+   PI LP L  R ED+ LL++ F+  FN + 
Sbjct: 355 VRLVAATNKDLEDAVTRGEFRADLYYRINVVPIFLPALRERREDVPLLAQFFLTKFN-EE 413

Query: 387 NTRIRGLNYRAIDCLKQYDFPGNVRELKHLI 417
           N R    +  A+  +   +FPGNVREL++ +
Sbjct: 414 NGRSLRFSEGALTAMGGCNFPGNVRELENCV 444