Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  219 bits (557), Expect = 2e-61
 Identities = 127/326 (38%), Positives = 192/326 (58%), Gaps = 17/326 (5%)

Query: 114 PMDTRQVHSILLLM---GESH-GIVSAF--ENADFL----KFIEVFSQQWSLLNDMEREE 163
           P     + S++LL    G +H G+V  +  + A F     + IE      SL+     + 
Sbjct: 104 PQVIPNIQSVILLRMLSGNTHLGVVGFYAKQKAQFCHRHAELIEPHKDTLSLITAFNLKG 163

Query: 164 QRRLELKQSLTDIERDSAQRSLANALSRT-LIGESAAMQKLREQIVSAANSQLSVMVQGE 222
           +  L   Q+LT        R L  A +   +IG  + ++++  Q+ + A    SV++ GE
Sbjct: 164 RNLLRANQALTQ-----QNRLLKQAFNPCGVIGADSGLKRVMTQVEAIAKLHTSVLILGE 218

Query: 223 TGTGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIA 282
           TG GKE++A AVH  S R   PF+ +NC AIPE L++SELFGY KGAF+GA+  K G   
Sbjct: 219 TGCGKEVIANAVHCKSQRADKPFIKVNCGAIPESLIDSELFGYEKGAFTGAEHRKAGFFE 278

Query: 283 QANGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVR 342
           QANGGT+FLDEIG++PL++Q +LLRVL++ T   +GG   ++ D R+++ATH NL   V+
Sbjct: 279 QANGGTIFLDEIGELPLSVQVRLLRVLQNGTITRVGGFDAINLDIRVIAATHRNLQAMVK 338

Query: 343 KKEFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHN-TRIRGLNYRAIDCL 401
           K+ FR+DL+YRL  +PI +P L  R  DI LL +HF+ V   + N  ++  ++   +D L
Sbjct: 339 KQTFREDLWYRLAVFPIEIPSLRQRRSDIPLLVQHFIEVLAAKFNLDKLPRVSSEQLDSL 398

Query: 402 KQYDFPGNVRELKHLIEFGCAQTADG 427
             Y +PGNVREL +++E    +  +G
Sbjct: 399 NHYHWPGNVRELINVLERAMIEAPEG 424