Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  222 bits (565), Expect = 3e-62
 Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 21/340 (6%)

Query: 182 QRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRK 241
           Q++ +   ++ L+G S A Q++ E+++  A +Q +V++ GETGTGKELVA AVHE S R+
Sbjct: 128 QQASSRPAAQGLVGRSPAFQQMLEKVLRVAPAQATVLLLGETGTGKELVAQAVHEASGRR 187

Query: 242 SAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTL 301
            +PFVA++C  + E+L ESELFG+ KGAF+GA   K GL+  A+GGTLFLDEIG++P  L
Sbjct: 188 DSPFVAVDCTGLTENLFESELFGHEKGAFTGAAFRKLGLVESASGGTLFLDEIGELPPAL 247

Query: 302 QAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITL 361
           Q KLLR+LE+ T+R +GG   L +DFRLV+ATH +L + VR++ FR+DLYYRL  +PI  
Sbjct: 248 QVKLLRLLETGTYRRVGGVDTLRADFRLVAATHRDLKEMVRQERFRRDLYYRLNTFPIHT 307

Query: 362 PRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGC 421
           P LA R EDI LL+   +    + H    R  +  A+  L   ++ GN+REL++LIE   
Sbjct: 308 PSLAERREDIPLLAASLLE--RVDHRPG-RHFSAEALAWLAGRNWEGNIRELRNLIE-RA 363

Query: 422 AQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDL 481
              +DG ++ A+  A                      E+  L   V    + +F V   L
Sbjct: 364 TLMSDGEEISAAKLAE---------------VADDGGESKALAEGVGGGADDSFRVPGPL 408

Query: 482 KQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYK 521
              ++Q E   ++  + R   D    A +LG+ +RTL  K
Sbjct: 409 --PLAQLEQRYLAWLMARPGADVRTLAPALGVSERTLYRK 446