Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., sigma-54 dependent transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  229 bits (583), Expect = 3e-64
 Identities = 147/388 (37%), Positives = 207/388 (53%), Gaps = 36/388 (9%)

Query: 179 DSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELS 238
           D     LA   +  L G SAAMQ++R  ++  A S   V++ GE+G+GKE  A A+H LS
Sbjct: 132 DPGNADLAERTNDLLPGHSAAMQEVRRSLMRLARSMAPVVISGESGSGKERAARAIHALS 191

Query: 239 SRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMP 298
           SR + PFVA+NC AIPE+L+E+E FGY KGAF+GADSD+QG    ANGGTL LDE+ D+P
Sbjct: 192 SRAARPFVAVNCGAIPENLMEAEFFGYVKGAFTGADSDRQGFFQAANGGTLMLDEVADLP 251

Query: 299 LTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYP 358
           LT+Q KLLR L+ R  R +G  +E   D R+V A+H NL   V    FR+DL+YRL    
Sbjct: 252 LTMQVKLLRALQERRVRKIGESREDPVDVRVVCASHQNLARLVAAGRFREDLFYRLNVLE 311

Query: 359 ITLPRLAARLEDIELLSEHFVRVFNLQH-NTRIRGLNYRAIDCLKQYDFPGNVRELKHLI 417
           + +P L  R ED+ +L+   +     ++ + R + L   A+  L  Y FPGNVREL++L+
Sbjct: 312 LRMPTLRERAEDVPVLAGVLLEQLASRYGDPRPKRLTRPALQQLCAYPFPGNVRELENLL 371

Query: 418 E----FGCAQTAD-------GTQVEASCFAHRLQTLPCLA-------------------- 446
           E    F   ++ D       G ++E S   HR +     A                    
Sbjct: 372 ERAYAFAEGESIDVDDLGALGAEIERSPLFHRTREAQAAAAGNHPLTPSPMAGWPDAVYM 431

Query: 447 PEATPVAVSVETENVDLEPS-VALAGE---PNFAVIHDLKQAVSQFEALIISERLNRFAG 502
           P   P  + +       EP+ VA   E   P+ A+  DL   +   E  +I   L++   
Sbjct: 432 PAPVPSPMGMPQPLASPEPAPVARPAEPALPSVALPIDLPAYLESVERNVILAALDQTGF 491

Query: 503 DRAKAAKSLGIPKRTLAYKCLKLEIKTP 530
           +R  AAK LG+  R L Y+  +L I+ P
Sbjct: 492 NRTAAAKLLGLSFRQLRYRMQQLGIRDP 519