Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 847 a.a., ClpV1 family T6SS ATPase from Pseudomonas fluorescens FW300-N2C3

 Score =  650 bits (1678), Expect = 0.0
 Identities = 385/851 (45%), Positives = 518/851 (60%), Gaps = 34/851 (3%)

Query: 4   IELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLE 63
           +EL +LI +LN  ++ ALE+AA  C++R H  V +E+ L  LLD    D   +L + GLE
Sbjct: 1   MELASLIGRLNPDNRRALERAAQRCMQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLE 60

Query: 64  VDQVKQAIASTYSREQVLDTY-------PAFSPLLVELLQEAWLLSSTELEQAELRSGAI 116
            D V           + LD +       PA S   + LL++A ++ ++ L    +RSG +
Sbjct: 61  RDAVAA------ETNKALDLFKSGSTRTPALSAHTIGLLEDA-VVQASVLGLDSIRSGLL 113

Query: 117 FLAALTRADRY-LSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAA 175
            LA L R +R  L     S    I R+ L+    +  ++S+   VA              
Sbjct: 114 LLALLDRDERRSLLLNSASSLLRIPRDALRAQL-LEWTESSREHVAGVRPAKPGEAPQKQ 172

Query: 176 ETPLGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIE 235
           +  L ++  ++T  ARNG +DP++ R+ E+   +DIL RRR+NNPI+VG  GVGK+A++E
Sbjct: 173 DPVLDQYTQDLTADARNGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVE 232

Query: 236 GLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFI 295
           GLALR+ AG VP  LQ V L  LDLG LQAGA VKGEFE+RLKGVIDA++ + KPIILFI
Sbjct: 233 GLALRIAAGDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILFI 292

Query: 296 DEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVK 355
           DEAHTLIG+G  EGGSDAANLLKPALARGEL T+AATTW EYKKYFEKDPAL RRFQLV+
Sbjct: 293 DEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLVQ 352

Query: 356 LDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTA 415
           ++EP    AV++LRG+ S  E+ H V + D A+  A +LS RYISGRQLPDKAI VLDTA
Sbjct: 353 VEEPDELTAVEMLRGVASKLEQHHGVQVLDAAIHEAVKLSHRYISGRQLPDKAISVLDTA 412

Query: 416 CARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAE 475
           CAR+A+     P  L  L    +  + E++ L R Q  G +   ER+ +L  +  ++   
Sbjct: 413 CARVALGQHDVPPPLESLRHRQNSLKDEVERLRREQATGLD-HRERITLLEGESTSNVQA 471

Query: 476 KAALTQSWQQQKSLVESIIALRAELMELSQAQEQDP---------DHLLVVRTALQEQYQ 526
              L   W +++  V  ++  R EL+ LS+  + +          DHL      L+    
Sbjct: 472 IRELETRWGEEREAVRELLDTRRELLALSERADSEKADTEVDNRIDHLAAELLRLE---A 528

Query: 527 ALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQET 586
            LDAI   + L+  QVD+  +A VIA WTG+PV +M  DE H +  L   +GQ + GQ T
Sbjct: 529 GLDAIRQDDPLVPEQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGQRVMGQGT 588

Query: 587 AIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMS 646
           A+  I + L   RA L  P +P G FLLVGP+GVGKTET   LA+ LYGG++ L +IN+S
Sbjct: 589 ALNTIAQRLQAYRAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLS 648

Query: 647 EYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFD 706
           EYQE HTVS+L G+PPGYVGYG GGVLTEA+R+ PYSVVLLDE+EKAHP+VL  FY  FD
Sbjct: 649 EYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFD 708

Query: 707 KGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLD---EALYPELAAFFKPALL 763
           KG + DG G V+D +N V   TSN+G + ++D        D   EAL+  L   F+PA L
Sbjct: 709 KGLMEDGTGLVVDFKNTVMLATSNVGAELLLDTPVAQLGTDAFNEALHKVLLQAFRPAFL 768

Query: 764 ARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGA 823
           ARM V+ Y PL +  L  IV  KL +L   +K     +   +  ++  +L++   S  GA
Sbjct: 769 ARMTVVAYRPLDEATLEGIVLAKLEKLRGRYKAATGKQFEFDAGIVKAVLAKC--SAAGA 826

Query: 824 RMLEAIIEGQL 834
           R +E ++  Q+
Sbjct: 827 RDVENVLMTQV 837