Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 863 a.a., type VI secretion ATPase, ClpV1 family from Pseudomonas stutzeri RCH2

 Score =  715 bits (1846), Expect = 0.0
 Identities = 400/862 (46%), Positives = 554/862 (64%), Gaps = 21/862 (2%)

Query: 1   MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQA 60
           MI ++L  L+  L+A++K  LE AA  C+ R   ++ +E  L  LL+     ++  L  A
Sbjct: 1   MINVDLQQLVQALDAETKRDLEGAAERCVVRGGSKILVEDLLLGLLERSDGLLKRALLDA 60

Query: 61  GLEVDQVKQAIASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAA 120
            ++   + QA+       +  +  P FS  LV+ LQ+A L++S EL Q+++   A+ LA 
Sbjct: 61  EVDAGALAQALQPRGEHSESRN--PVFSTELVQWLQDALLVASLELGQSQIDQAALILAL 118

Query: 121 LTRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLG 180
           L    RY       L   ++ E L+           + A+++  + +     A  E+ L 
Sbjct: 119 LRNPLRYAGSHYQPLLARLDAERLR-----------DFALSQQPQGSTGKPAAGGESNLA 167

Query: 181 RFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALR 240
           RF  N T+QAR+G+LDPVL R++ +  M+DIL RRRKNNPIVVGEAGVGK+A++EGLALR
Sbjct: 168 RFTHNFTQQARDGKLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALR 227

Query: 241 VVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHT 300
           + +G+VP  L+ VEL  LDLG LQAGASVKGEFE+RL+GVID +K SPKPIILFIDEAHT
Sbjct: 228 IASGEVPATLKGVELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHT 287

Query: 301 LIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPT 360
           LIG+G Q G  DAANLLKPALARGEL T+AATTW EYKKYFEKDPAL RRFQ V+L EP+
Sbjct: 288 LIGAGGQAGSGDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPS 347

Query: 361 IDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIA 420
           + +AV ILRGL  VYEK+H + + DDA+ AAAELSARY++GRQLPDKA+DVLDTACAR+ 
Sbjct: 348 VQEAVTILRGLAPVYEKSHGIYLRDDAVAAAAELSARYLAGRQLPDKAVDVLDTACARVR 407

Query: 421 INMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALT 480
           I++   P+ L  L     + + + + + R   +G  VD+  L+ L  + +A   E   L 
Sbjct: 408 ISLAAAPEALERLRGEVAEGERQREAMRRDLAVGLPVDAAALERLEQRLIAAGDEIEQLE 467

Query: 481 QSWQQQKSLVESIIALRAELMELSQAQEQDPD--HLLVVRTALQEQYQALDAIDHAERLM 538
             W +Q+ L E ++ LR    E   A  +D +   L  + T L+     L A    +RL+
Sbjct: 468 TRWAKQRLLAERLLDLRKRTAEARSAANEDGEVPSLDELETELRAVQAELAAAQAKQRLV 527

Query: 539 HPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTA 598
             +V    +AEVI+ WTGVP+ Q+  +   ++ +  + L   ++GQE A+E + R +  A
Sbjct: 528 SHEVCPRLVAEVISHWTGVPLAQLAREHNAQVANFAADLRARVRGQEQAVEALDRAMRAA 587

Query: 599 RADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLI 658
            A L +P  P G FLLVGPSGVGKTET + LA+ LYGG++FLT INMSE+QEKH+VSRLI
Sbjct: 588 AAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHSVSRLI 647

Query: 659 GSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVI 718
           G+PPGYVGYGEGG+LTEA+R+ PYSV+LLDEVEKA P+V+N+FYQ FDKG   DGEGR I
Sbjct: 648 GAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREI 707

Query: 719 DCQNIVFFLTSNLGYQTIVDYADEPAK-----LDEALYPELAAFFKPALLARMEVIPYLP 773
           + +N +  +TSNL  + I  +     +     L+ A+ P+L+  FKPALL RM V+PY P
Sbjct: 708 NFRNTLILMTSNLASERIASFCTAGQRPTAEDLELAIRPQLSQHFKPALLGRMRVVPYYP 767

Query: 774 LGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQ 833
           +   VL ++V  KL R  +  + R   +     +L+  +  R   S++GAR+++ +IE  
Sbjct: 768 IAGAVLDELVALKLVRFGERLQRR-QLQFSHCPALVTHLSERCDDSDSGARLIDHLIEQH 826

Query: 834 LLPPVSLALLNKLAERAPVERI 855
           L P V   LL+ +A   P++++
Sbjct: 827 LQPLVVDRLLDAMASGEPLQQV 848