Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 867 a.a., AAA ATPase, central region:Clp, N terminal:Clp, N terminal from Pseudomonas syringae pv. syringae B728a

 Score =  709 bits (1830), Expect = 0.0
 Identities = 392/867 (45%), Positives = 559/867 (64%), Gaps = 26/867 (2%)

Query: 4   IELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLE 63
           + L +L AKLN  S+ A E AA+LC+   H +V +E+ L  LLDN  +D+ ++L+   + 
Sbjct: 1   MNLKSLFAKLNETSRTATESAAALCLSENHYDVEVEHLLLQLLDNNDNDLPVILRHYDVV 60

Query: 64  VDQVKQAIASTYSREQVLDTY-PAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALT 122
            D+++  + +     +  +T  PA SP +  ++++AW+L+S E  Q+++R+G +  A L 
Sbjct: 61  PDRLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWVLASIEFGQSQIRTGHLVQALLD 120

Query: 123 R-ADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAK----TDKNAANPLQAAAET 177
             A R +        E IN ++L+ + + ++  S ET ++K     D +     +   +T
Sbjct: 121 DDALRRVVIGSAPELEKINADDLRLNMSALVEGSPETKLSKPLANADASTGATTKGNGKT 180

Query: 178 P-LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEG 236
           P L ++  N+T+ AR+G +DPVL RE E+  MVDIL RRR+NNPI+ GEAGVGK+A++EG
Sbjct: 181 PALDQYTVNLTQSARDGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG 240

Query: 237 LALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFID 296
           LALR+V G VP+ L+ V +++LDLG LQAGA VKGEFE RLK VI+  K+S  PIILFID
Sbjct: 241 LALRIVQGDVPSVLKGVAIHTLDLGLLQAGAGVKGEFENRLKSVIEETKRSLHPIILFID 300

Query: 297 EAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKL 356
           EAHTLIGSG Q G +DAANLLKPALARGEL T+AATTW EYKKYFEKD AL RRFQ+VK+
Sbjct: 301 EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV 360

Query: 357 DEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTAC 416
           +EP  D+A+ +LRGL +  ++ H V + D+AL  A  LS RYI+GRQLPDKA+ VLDTAC
Sbjct: 361 EEPDEDKAIHMLRGLLAKMQEHHKVTVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTAC 420

Query: 417 ARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEK 476
           AR+A+  +  P  L   +        EI +LE+    G +  + RL  L  +  A++  +
Sbjct: 421 ARVALGQSAQPGALEDCKRHIDNLNAEITVLEQETAKGSD-HARRLTALHEELQAEQETR 479

Query: 477 AALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAER 536
            +L Q W+++  LVE + AL      + Q+ E D   +  VR  L        ++   + 
Sbjct: 480 ESLEQQWKRELELVEKLGAL-----SVPQSGEPDAGQIAAVRAELA-------SVQGEQP 527

Query: 537 LMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLL 596
           L+H  VD   I EVI+ WTG+P+ +M  DE+  +  L ++LG+ + GQ+ A+E I + + 
Sbjct: 528 LVHALVDGGTIGEVISGWTGIPLGKMLRDEIDTVQSLPALLGERVLGQDHALEEIGKRIK 587

Query: 597 TARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSR 656
            +RA +  P +P G FLL+GPSGVGKTET + LA+ LYGG++ + TINMSEYQE HTVS 
Sbjct: 588 ISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNVITINMSEYQEAHTVSS 647

Query: 657 LIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGR 716
           L GSPPGYVGYGEGGVLTEA+R+ PYSVVLLDEVEKAHP+VL +F+Q FDKG + DGEGR
Sbjct: 648 LKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGR 707

Query: 717 VIDCQNIVFFLTSNLGYQTIVDYA------DEPAKLDEALYPELAAFFKPALLARMEVIP 770
            I+ +N V  LTSN G   I+ +         P  + E L  EL   FKPA L R+ ++P
Sbjct: 708 EINFRNTVIILTSNTGTDRIMQWCLNTEQKPTPDDIVEGLRDELNQVFKPAFLGRLTIVP 767

Query: 771 YLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAII 830
           Y P+   +L +IV  KL R+ K F+  + A +  +E+LI  I SR T  ++GAR ++ I+
Sbjct: 768 YYPVQDAILERIVGLKLERIRKRFERNHQAVLRYDEALIKAIASRCTEVDSGARNIDNIL 827

Query: 831 EGQLLPPVSLALLNKLAERAPVERIRL 857
              L+P ++  +L ++A+  P++ + +
Sbjct: 828 SKTLMPELAQRVLERMAQDKPIQSLTI 854