Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., AAA ATPase, central region:Clp, N terminal:Clp, N terminal from Pseudomonas syringae pv. syringae B728a

 Score =  512 bits (1319), Expect = e-149
 Identities = 307/849 (36%), Positives = 487/849 (57%), Gaps = 32/849 (3%)

Query: 10  IAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQ 69
           I +L ++ +LAL  + SL +   HP +   + +  LL+     ++ +L Q G +++ +++
Sbjct: 3   IDRLTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLLQVGFDINSLRK 62

Query: 70  AIASTYSREQVLDTYPA---FSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADR 126
            +++   R   +         S  L  LL +A  L+  + +Q  + S  + LAA+   D 
Sbjct: 63  ELSAELDRLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQF-ISSELVLLAAM---DE 118

Query: 127 YLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNV 186
                 + L +G++++ L+     +  + A       D N     QA     L ++  ++
Sbjct: 119 NSKLGKLLLGQGVSKKALENAINNLRGEGAVN-----DPNVEESRQA-----LDKYTVDL 168

Query: 187 TEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKV 246
           T++A  G+LDPV+ R++E+   + +L RR KNNP+++GE GVGK+A+ EGLA R++ G+V
Sbjct: 169 TKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEV 228

Query: 247 PTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGN 306
           P  L+   L SLD+G L AGA  +GEFE+RLK +++ + +    IILFIDE HT++G+G 
Sbjct: 229 PDGLRGKRLLSLDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGK 288

Query: 307 QEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVD 366
            EG  DA N+LKPALARGEL  V ATT  EY++Y EKD AL RRFQ V +DEP+ +  + 
Sbjct: 289 GEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIA 348

Query: 367 ILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTP 426
           ILRGL   YE  H V ITD A+ AAA+LS RYI+ RQLPDKAID++D A +RI + + + 
Sbjct: 349 ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSK 408

Query: 427 PKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQ 486
           P+ L  LE    Q ++E   L++ +    E   +RL+ L+ +    E E A L + W  +
Sbjct: 409 PEVLDRLERRLIQLKVEAQALKKEK---DEAAIKRLEKLQGEIERLELEYADLEEIWTSE 465

Query: 487 KSLVESIIALRAEL----MELSQAQEQDPDHLLV-----VRTALQEQYQALDAIDHAE-R 536
           K+ V     ++ ++     EL  A+ +   + +      +   L+   Q +D     E +
Sbjct: 466 KAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQHGKPENQ 525

Query: 537 LMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLL 596
           L+  +V  ++IAEV++ WTG+PV +M   E  K+  + ++L   + GQE A+  +   + 
Sbjct: 526 LLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLLRMETLLHNRVIGQEEAVVAVSNAVR 585

Query: 597 TARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSR 656
            +RA L  P RP G+F+ +GP+GVGKTE    LAE L+  ++ +  I+MSE+ EKH+V+R
Sbjct: 586 RSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVAR 645

Query: 657 LIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGR 716
           LIG+PPGYVGY EGG LTEA+R+ PYS++LLDEVEKAH +V NI  Q  + G + D  GR
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRKPYSLILLDEVEKAHSDVFNILLQVLEDGRLTDSHGR 705

Query: 717 VIDCQNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARM-EVIPYLPLG 775
            +D +N V  +TSNLG   I +   +      A+   +   F+P  + R+ EV+ + PL 
Sbjct: 706 TVDFRNTVIVMTSNLGSAQIQELVGDREAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLA 765

Query: 776 KEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLL 835
           ++ +A I   +L RL K    R    + +    +D++++       GAR L+  I+  + 
Sbjct: 766 RDQIAGITDIQLGRLRKRLAER-ELSMTLSPEALDKLIAVGYDPVYGARPLKRAIQRWIE 824

Query: 836 PPVSLALLN 844
            P++  +L+
Sbjct: 825 NPLAQMILS 833