Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 883 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  511 bits (1317), Expect = e-149
 Identities = 324/848 (38%), Positives = 483/848 (56%), Gaps = 46/848 (5%)

Query: 20  ALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTYSREQ 79
           A+ +   +  + QH ++  E+    LL  P   +  +LK+AGLE  Q+          +Q
Sbjct: 25  AIVRTTDVAKQAQHQQIESEHLFLALLQEPGLALN-ILKKAGLEAAQL----------QQ 73

Query: 80  VLDTYPAFSPLLVELLQEAWLLSSTE--LEQAELRSGAIFLAALTRADRYLSFKLISLFE 137
             + + A  P +    Q  +L  S +  L+QA+          ++     LSF   S F 
Sbjct: 74  FTERFIARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPRDSRFG 133

Query: 138 GINRENLK---KHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARNGE 194
            +  +  K   K    I+     +    TD+N     +A     L ++  ++TE AR G+
Sbjct: 134 RLLSQEFKVDEKQLRQIIQQIRGSQKV-TDQNPEGKYEA-----LEKYGRDLTEMARRGK 187

Query: 195 LDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVE 254
           LDPV+ R++E+   + IL RR KNNP+++GE GVGK+A+ EGLA R++ G VP  L++  
Sbjct: 188 LDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDRR 247

Query: 255 LYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAA 314
           L +LD+G L AGA  +GEFE+RLK V+  +  S   IILFIDE HT++G+G  +G  DA 
Sbjct: 248 LIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDAG 307

Query: 315 NLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSV 374
           NLLKP LARGEL  + ATT  EY++Y EKD AL RRFQ V +D+PT++  + ILRGL   
Sbjct: 308 NLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKER 367

Query: 375 YEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLALLE 434
           YE  H V I+D+AL AAA LS RYIS R LPDKAID++D + AR+ + +T+ P+ L  ++
Sbjct: 368 YEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEID 427

Query: 435 TLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD-EAEKAALTQSWQQQKSLVESI 493
               Q ++E   L++   L  +   +RL+    +ELAD + E+ +L+  WQ +K ++  I
Sbjct: 428 RKILQLEMERLSLQKESDLASQERLQRLE----KELADLKEEQRSLSSQWQAEKDVITDI 483

Query: 494 IALRAELME---LSQAQEQDPDHLLVVR------TALQEQYQALD---AIDH--AERLMH 539
            +++ E+ +   L Q  E+D D            T LQ +   ++   A  H   + L+ 
Sbjct: 484 QSVKEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLR 543

Query: 540 PQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTAR 599
            +V    IAE+I+ WTG+PV ++   E+ K+ +L   L Q + GQE A+  +   +  +R
Sbjct: 544 EEVTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSR 603

Query: 600 ADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIG 659
           A L  P RP  +F+ +GP+GVGKTE    LA  L+  +  +  I+MSEY EKH VSRLIG
Sbjct: 604 AGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIG 663

Query: 660 SPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVID 719
           +PPGYVGY EGG LTEA+R+ PYSV+L DE+EKAHP+V N+  Q  D G + D  GR +D
Sbjct: 664 APPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVD 723

Query: 720 CQNIVFFLTSNLGYQTIVDYADEPAKLDE---ALYPELAAFFKPALLARM-EVIPYLPLG 775
            +N +  LTSN+G Q I+D A + ++ +E    +   L A F+P  L R+ E I +  L 
Sbjct: 724 FKNTILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLR 783

Query: 776 KEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLL 835
           K+ L QIVR +L RLE+    R    + +    ID ++        GAR L+ +I+ +L 
Sbjct: 784 KDQLQQIVRIQLHRLEERLSDR-KLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELE 842

Query: 836 PPVSLALL 843
             ++ A+L
Sbjct: 843 TAIAKAIL 850