Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 895 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  503 bits (1294), Expect = e-146
 Identities = 329/872 (37%), Positives = 486/872 (55%), Gaps = 58/872 (6%)

Query: 7   PTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQ 66
           PT   +   Q+  A+ ++ ++  + +  ++ +E+ L  LLD        +L +AG+ V  
Sbjct: 3   PTDPNRFTDQAWDAIVESQTVARQLRQQQLEVEHVLLALLDQESGVAAEILAKAGVAVAN 62

Query: 67  VKQAIASTYSREQVLDTYPAFSPL------LVELLQEAWLLSSTELEQAELRSGAIFLAA 120
           ++Q +   ++R Q  +       L      L++L + A      EL Q E       L  
Sbjct: 63  LRQPLED-FARRQPRNASGTQLYLGRGLDRLLDLAERA-----RELWQDEFIGVEHLLMG 116

Query: 121 LTRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETP-- 178
               DR        L +G+  +          + + ET +      AA+  +A    P  
Sbjct: 117 FVEDDRIGR----RLAQGLKLD----------AKTLETTIQALRSPAADEAEAEESEPSY 162

Query: 179 --LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEG 236
             L ++  ++T  A   +LDPV+ R+ E+  ++ +L RR KNNP+++GE GVGK+A+ EG
Sbjct: 163 PFLSKYGRDLTALAEQEKLDPVIGRDLEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEG 222

Query: 237 LALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFID 296
           LA R+VAG+VP  L+   L SLD+G L AGA  +GEFE+RL+ V+  +  S   ++LFID
Sbjct: 223 LAQRIVAGEVPDSLKQRRLISLDMGSLIAGAKYRGEFEERLRAVLHEVTHSDGQMVLFID 282

Query: 297 EAHTLIGSGNQEGGS--DAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLV 354
           E HT++G+G  + GS  DA NLLKP LARGEL  + ATT  EY++  EKDPAL RRFQ V
Sbjct: 283 ELHTVVGAGAGQQGSAMDAGNLLKPMLARGELRCIGATTTDEYRRTIEKDPALERRFQQV 342

Query: 355 KLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDT 414
            + +P+++  + ILRGL   YE  H V ITD AL AAA+LS RYIS R LPDKAID++D 
Sbjct: 343 YVSQPSVEDTIAILRGLKERYEGHHGVKITDGALMAAAKLSHRYISDRFLPDKAIDLIDE 402

Query: 415 ACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQ-EVDSERLDVLRNQELADE 473
           A A++ + +T+ P  L  LE      QLE++ L  +   GQ  V S+RL  ++ +    +
Sbjct: 403 ASAQLKMEITSKPSELEDLER--RLLQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQ 460

Query: 474 AEKAALTQSWQQQKSLVESIIALRAELMELSQAQEQ-DPDH---------------LLVV 517
            ++A L Q WQQ+K L+E +  L+ E   L Q   Q + +H               L   
Sbjct: 461 EQQARLNQQWQQEKQLLEELGRLQEEEETLRQQVNQAEREHDLNKGAELKFGQLEALQQQ 520

Query: 518 RTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSIL 577
           R A++EQ QAL A  + + L+  QV+   IAE++A WT +PV ++   E  K+  L S L
Sbjct: 521 RQAIEEQIQALHA--NGQTLLREQVEEADIAEIVARWTNIPVQRLLESERQKLLQLESFL 578

Query: 578 GQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGK 637
            Q + GQ+ A+  +   +  ARA ++ P RP G+FL +GP+GVGKTE    LA  L+  +
Sbjct: 579 HQRVIGQDEAVVAVAAAIRRARAGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAE 638

Query: 638 QFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEV 697
             L   +MSEY EK+++SRLIG+PPGY+GY EGG L+EAIR+ PY+VVL DEVEKAHP+V
Sbjct: 639 DALIRFDMSEYMEKNSISRLIGAPPGYIGYEEGGQLSEAIRRHPYAVVLFDEVEKAHPDV 698

Query: 698 LNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAF 757
            N+  Q  D G I D +GR ID  N V  +TSN+G Q I++  +E A LD      L A 
Sbjct: 699 FNLLLQVLDDGRITDSQGRTIDFCNAVIVMTSNIGSQFILEMGEEEASLDAVELKVLGAL 758

Query: 758 ---FKPALLARM-EVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEIL 813
              F+P  L R+ + I + PL +  L QIV  +L RL++L   +  A + +  +    + 
Sbjct: 759 RQHFRPEFLNRIDDTILFQPLSRGQLQQIVDIQLQRLKRLLAEQAIA-LNVTPAAAANLA 817

Query: 814 SRATRSENGARMLEAIIEGQLLPPVSLALLNK 845
            R      GAR L+  I+  +  PV+  +L +
Sbjct: 818 DRGYDPVYGARPLKRAIQRLIENPVASLILEQ 849