Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., type VI secretion system ATPase TssH from Rahnella sp. WP5

 Score =  612 bits (1579), Expect = e-179
 Identities = 358/845 (42%), Positives = 519/845 (61%), Gaps = 36/845 (4%)

Query: 6   LPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVD 65
           L  ++ K+N +++  L+ A SL + R H EV +E+ L  L+    + +  +   AGL  D
Sbjct: 5   LKKIVEKMNVEARECLDAAISLAVSRTHHEVDIEHLLLALVTRQPALIEQLCLNAGLRGD 64

Query: 66  QVKQAIASTYSREQVLDTY-PAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRA 124
            +  A+  + +  +  +T  P  S LLVE L+++WL +S   +Q +L   A FL +L  +
Sbjct: 65  ALVDALKVSLNHLRSGNTRSPVLSELLVEHLEKSWLHASACWQQTQLPVQA-FLGSLLAS 123

Query: 125 DRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCT 184
           ++     L S  +      + +    +L D+   A A T+  AA   +   ++ + +F  
Sbjct: 124 EKDNQIHLSSALQQALLCQVDRA-DRLLHDACAPAQA-TNHPAAT--RHNTDSAVMKFTR 179

Query: 185 NVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAG 244
           N+TEQAR+  LDP L RE E+  ++D+L RRR+NNP++ GE GVGK+A++EGLA R+  G
Sbjct: 180 NLTEQARDAALDPALGREPEIRQLIDVLLRRRQNNPVLTGEPGVGKTALVEGLAQRIADG 239

Query: 245 KVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGS 304
            VP  L+++E+ SLD+G LQAGASVKGEFE RL+ ++  +K+ P P+ILFIDEAHTLIG+
Sbjct: 240 TVPEALKSMEILSLDMGLLQAGASVKGEFENRLQTLLREVKEYPSPVILFIDEAHTLIGA 299

Query: 305 GNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQA 364
           G Q G +DAANLLKPALARGE+  VAATTW EYKKYFEKD AL RRFQ++K+ EP  + A
Sbjct: 300 GGQAGQNDAANLLKPALARGEMRVVAATTWAEYKKYFEKDAALARRFQVIKVAEPDEETA 359

Query: 365 VDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMT 424
           + +LR L     K H V I + AL AA  LS+RYISGRQLPDK+I +LDTACAR+AI+  
Sbjct: 360 IAMLRSLKPALSKHHGVQILESALVAAVRLSSRYISGRQLPDKSISLLDTACARVAISQC 419

Query: 425 TPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQ 484
             PK +  L  +           ER   L +  +  R+  L  +E   +    AL   W+
Sbjct: 420 HEPKEIEDLNAMISNIH-----TERESLLKEGENPSRVKWLDQRESELKQSLEALLPVWR 474

Query: 485 QQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHPQVDA 544
           QQ+ +V  I ++            +D   +  +R  L E ++        + L++  VDA
Sbjct: 475 QQQQIVAQINSI------------EDVAQIAALRAQLAEMHK-------DQALVYDCVDA 515

Query: 545 DQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRR 604
             +A+VIA WTG+P+ +M   E  ++  L + L   + GQ  A+  I + +   RA+L  
Sbjct: 516 TCVADVIAGWTGIPLGRMMEKEQQQLGDLVARLESRVIGQSHALADIAQQIRIGRANLAD 575

Query: 605 PGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGY 664
           P +P G F+L GPSGVGKTET + L+E L+GG+Q L TINMSEYQE H+VS L GSPPGY
Sbjct: 576 PVKPTGVFMLAGPSGVGKTETALALSELLFGGEQSLITINMSEYQEAHSVSGLKGSPPGY 635

Query: 665 VGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIV 724
           VGYG+GGVLTEA+R+ PYSVVLLDEVEKAHP+V+ IFYQ FDKG + D EG++I+ +N +
Sbjct: 636 VGYGQGGVLTEAVRRRPYSVVLLDEVEKAHPDVMEIFYQVFDKGVMEDAEGQLINFRNTL 695

Query: 725 FFLTSNLGYQTIVDYA----DEPAKLDEALYPELAAFFKPALLARMEVIPYLPLGKEVLA 780
             LTSNL    ++        +   L   L PE   +F+PAL+ R+++IPYLP+  E LA
Sbjct: 696 IILTSNLASDRVMTACAAGNTDQKALTALLRPEFDQYFRPALMGRLQLIPYLPVVGETLA 755

Query: 781 QIVRGKLARLEKLFK--TRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPV 838
           +I+R K+ ++ K F      N+ +   E +++ + SR    ++GAR ++A++  +LLP +
Sbjct: 756 KIIRLKIDKVCKRFSGAGEGNSSLSYSEKVVEFMASRCQVEQSGAREIDAVLNRELLPLL 815

Query: 839 SLALL 843
           +  LL
Sbjct: 816 TDRLL 820