Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., ATP-dependent chaperone ClpB from Rhodopseudomonas palustris CGA009

 Score =  513 bits (1321), Expect = e-149
 Identities = 299/738 (40%), Positives = 453/738 (61%), Gaps = 30/738 (4%)

Query: 138 GINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARNGELDP 197
           G+  +NL    A+       TA + T +NA + L+        ++  ++T+ AR+G+LDP
Sbjct: 132 GVTPQNLNA--AINALRKGRTADSATAENAYDALK--------KYARDLTQAARDGKLDP 181

Query: 198 VLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYS 257
           V+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLALR++ G VP  L++ +L +
Sbjct: 182 VIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLLA 241

Query: 258 LDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLL 317
           LD+G L AGA  +GEFE+RLK V++ +  +   IILFIDE HTL+G+G  +G  DA+NLL
Sbjct: 242 LDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLL 301

Query: 318 KPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVYEK 377
           KPALARGEL  + ATT  EY+K+ EKD AL RRFQ V + EPT++  V ILRGL   YE+
Sbjct: 302 KPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKDKYEQ 361

Query: 378 AHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLALLETLC 437
            H V I D AL AA  LS RYI+ R LPDKAID++D A AR+ + + + P+ L  ++   
Sbjct: 362 HHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREI 421

Query: 438 HQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEK-AALTQSWQQQKSLVESIIAL 496
            + ++E + L++    G +    RL V   +ELAD  EK AALTQ W  +K+ +     L
Sbjct: 422 VRLKIEQEALKKETDPGSKA---RL-VTLEKELADLEEKSAALTQRWSAEKNKLSDAQKL 477

Query: 497 RAEL----MELSQAQE----QDPDHLLVVR-TALQEQYQALDAIDHAERLMHPQVDADQI 547
           ++EL    +EL+ AQ     Q    L   R   L+++   ++A +++  ++   V A+ I
Sbjct: 478 KSELDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEANENSGAMVEEAVTANHI 537

Query: 548 AEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGR 607
           A+V++ WTGVPVD+M   E  K+  +   LGQ + GQ  A+  +   +  ARA L+ P R
Sbjct: 538 AQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNR 597

Query: 608 PKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGY 667
           P G+F+ +GP+GVGKTE    LAE L+  +  +  I+MSE+ EKH+V+RLIG+PPGYVGY
Sbjct: 598 PMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGY 657

Query: 668 GEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIVFFL 727
            EGGVLTEA+R+ PY V+L DE+EKAHP+V N+  Q  D G + DG+GR +D +N +  +
Sbjct: 658 DEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVM 717

Query: 728 TSNLGYQTIVDY--ADEPAKLDEALYPELAAFFKPALLARM-EVIPYLPLGKEVLAQIVR 784
           TSNLG + +V+    ++   + E +   + A F+P  L R+ E+I +  L K  + +IV 
Sbjct: 718 TSNLGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVD 777

Query: 785 GKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSLALLN 844
            + ARL KL + R    + ++ +  D +  +      GAR L+ +I+  +  P++  +L 
Sbjct: 778 IQFARLTKLLEDR-KIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILE 836

Query: 845 KLAERAPVERIRLAAEAG 862
              +    + + ++AE G
Sbjct: 837 GSVKDG--DHVAISAEGG 852