Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., chaperone protein ClpB from Phaeobacter inhibens DSM 17395

 Score =  484 bits (1245), Expect = e-140
 Identities = 276/678 (40%), Positives = 407/678 (60%), Gaps = 18/678 (2%)

Query: 179 LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLA 238
           L ++  ++TE  R+G++DP++ R+ E+   + +L RR KNNP+++GE GVGK+A+ EG+A
Sbjct: 188 LKKYARDLTEAVRDGKIDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMA 247

Query: 239 LRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEA 298
           LR+V G VP  L++ +L SLD+G L AGA  +GEFE+RLK V+  + ++   IILFIDE 
Sbjct: 248 LRIVNGDVPESLRDKQLLSLDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEM 307

Query: 299 HTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDE 358
           HTL+G+G  +G  DAANL+KPALARGEL  + ATT  EY+KY EKD AL RRFQ V + E
Sbjct: 308 HTLVGAGKSDGAMDAANLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTE 367

Query: 359 PTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACAR 418
           PT++  + ILRG+   YE  H V I D AL +AA LS RYI+ R LPDKAID++D A AR
Sbjct: 368 PTVEDTISILRGIKEKYELHHGVRIADAALVSAATLSHRYITDRFLPDKAIDLMDEAAAR 427

Query: 419 IAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAA 478
           + + + + P+ L  L+    Q Q+E + L+           +RL+ L+ +ELA+  EK+A
Sbjct: 428 LRMQVDSKPEELDALDRQILQMQIEEEALKLED---DAASKDRLETLQ-KELAELQEKSA 483

Query: 479 -LTQSWQQQKSLVESIIALRAEL----MELSQAQEQD-----PDHLLVVRTALQEQYQAL 528
            +T  WQ ++  + S   L+ +L     +L  A+ +       +    V   L++Q    
Sbjct: 484 EMTAQWQSERDKLASARGLKEQLDRARADLDAAKREGNLARAGELSYGVIPGLEKQLSEA 543

Query: 529 DAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAI 588
           +A +    ++   V  +QIA V+  WTG+P  +M   E  K+  + + L   + GQ+ A+
Sbjct: 544 EASERNGLMVEEAVRPEQIAGVVERWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAV 603

Query: 589 ERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEY 648
             +   +  ARA L    RP G+FL +GP+GVGKTE    +A+ L+     +  ++MSE+
Sbjct: 604 TAVSNAVRRARAGLNDENRPLGSFLFLGPTGVGKTELTKAVADFLFDDDSAMVRVDMSEF 663

Query: 649 QEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKG 708
            EKH V+RLIG+PPGYVGY EGGVLTEA+R+ PY V+L DEVEKAHP+V N+  Q  D G
Sbjct: 664 MEKHAVARLIGAPPGYVGYDEGGVLTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVLDDG 723

Query: 709 EIADGEGRVIDCQNIVFFLTSNLGYQTIVDYAD--EPAKLDEALYPELAAFFKPALLARM 766
            + DG+GR +D +  +  LTSNLG Q +    D  + A     +   + A F+P  L R+
Sbjct: 724 VLTDGQGRTVDFKQTLIILTSNLGAQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRL 783

Query: 767 -EVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARM 825
            E I +  LG++ +  IV  +LARLEK    R    + +++     +         GAR 
Sbjct: 784 DETIIFDRLGRKDMDGIVTLQLARLEKRLVGR-KITLELDDGAKTWLADEGYDPVFGARP 842

Query: 826 LEAIIEGQLLPPVSLALL 843
           L+ +I+  L  P++  LL
Sbjct: 843 LKRVIQRVLQNPLAEMLL 860